RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
HSPG2-213ENST00000498495 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
HSPG2-213ENST00000498495 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
HSPG2-213ENST00000498495 NCOR1O75376 2440 aa13.66□□□□□ -0.22
HSPG2-213ENST00000498495 NOTCH4Q99466 2003 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 FGFR1OPO95684 399 aaKnown RBP13.65□□□□□ -0.22
HSPG2-213ENST00000498495 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
HSPG2-213ENST00000498495 BDNFP23560 247 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 MAGEA11P43364 429 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 GPR15P49685 360 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 CCDC142Q17RM4 750 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 ARHGAP15Q53QZ3 475 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 WDR44Q5JSH3 913 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 SHKBP1Q8TBC3 707 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 ZSWIM3Q96MP5 696 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 SRRTQ9BXP5 876 aaKnown RBP13.65□□□□□ -0.22
HSPG2-213ENST00000498495 SDCBP2Q9H190 292 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 ZFP14Q9HCL3 533 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-213ENST00000498495 FBXL21Q9UKT6 434 aa13.65□□□□□ -0.22
HSPG2-213ENST00000498495 MAGED2Q9UNF1 606 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-213ENST00000498495 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
HSPG2-213ENST00000498495 GNA14O95837 355 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 SRFP11831 508 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 ANXA13P27216 316 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 CDC25CP30307 473 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
HSPG2-213ENST00000498495 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 TANGO2Q6ICL3 276 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 POTEHQ6S545 545 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 HFE2Q6ZVN8 426 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 GAREM2Q75VX8 874 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 UNC93AQ86WB7 457 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 ASIC4Q96FT7 647 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 KXD1Q9BQD3 176 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 CYP3A43Q9HB55 503 aa13.64□□□□□ -0.23
HSPG2-213ENST00000498495 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
HSPG2-213ENST00000498495 SLC38A8A6NNN8 435 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-213ENST00000498495 TRIM66O15016 1216 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 LRRN2O75325 713 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ECI2O75521 394 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CFHP08603 1231 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ASPAP45381 313 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 NDST1P52848 882 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CBWD6Q4V339 395 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CBWD3Q5JTY5 395 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CBWD5Q5RIA9 395 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 GPR158Q5T848 1215 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ACOT1Q86TX2 421 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 CRYBG2Q8N1P7 616 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-213ENST00000498495 SMARCD2Q92925 531 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 SLC35C1Q96A29 364 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ELSPBP1Q96BH3 223 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 FAXDC2Q96IV6 333 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 MED10Q9BTT4 135 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 PLA2G2FQ9BZM2 168 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 UXTQ9UBK9 157 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-213ENST00000498495 WNT16Q9UBV4 365 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 RWDD2AQ9UIY3 292 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 COQ4Q9Y3A0 265 aa13.63□□□□□ -0.23
HSPG2-213ENST00000498495 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 DOCK8Q8NF50 2099 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 NOL4O94818 638 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 F11P03951 625 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 CCDC192P0DO97 292 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 CD58P19256 250 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 NLRP12P59046 1061 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 GPC5P78333 572 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 CETN1Q12798 172 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 SUGP1Q8IWZ8 645 aaKnown RBP13.62□□□□□ -0.23
HSPG2-213ENST00000498495 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 TATDN2Q93075 761 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 E2F7Q96AV8 911 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 MYRFLQ96LU7 910 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 CEP295NLQ96MC4 621 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 NT5C1AQ9BXI3 368 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 ZNF518BQ9C0D4 1074 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms