RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MON1AQ86VX9 555 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 CCDC33Q8N5R6 958 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 EZH1Q92800 747 aaPredicted RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 CNOT6LQ96LI5 555 aaKnown RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 GTPBP2Q9BX10 602 aaKnown RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 FOXP1Q9H334 677 aaPredicted RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
CDK9-205ENST00000498339 PCNX2A6NKB5 2137 aa12.59□□□□□ -0.39
CDK9-205ENST00000498339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 K7ENM7 598 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 OGTO15294 1046 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 NFATC1O95644 943 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 CYP11A1P05108 521 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 USP17L7P0C7H9 530 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 HMGA1P17096 107 aaKnown RBP12.58□□□□□ -0.4
CDK9-205ENST00000498339 ENGP17813 658 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 PAX3P23760 479 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 CDC25AP30304 524 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 TAF6P49848 677 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 USP4Q13107 963 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 KCNB1Q14721 858 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 ZNF77Q15935 545 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 KCNK18Q7Z418 384 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 RASSF3Q86WH2 238 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 TMEFF1Q8IYR6 380 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 IGSF22Q8N9C0 903 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 CDK5RAP3Q96JB5 506 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 TSPAN18Q96SJ8 248 aa12.58□□□□□ -0.4
CDK9-205ENST00000498339 NTPCRQ9BSD7 190 aaKnown RBP12.58□□□□□ -0.4
CDK9-205ENST00000498339 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
CDK9-205ENST00000498339 EVLQ9UI08 416 aaPredicted RBP12.58□□□□□ -0.4
CDK9-205ENST00000498339 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 EML3Q32P44 896 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 WSCD1Q658N2 575 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 SYT12Q8IV01 421 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 CD302Q8IX05 232 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 EFCAB13Q8IY85 973 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 PGBD3Q8N328 593 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 SH3RF2Q8TEC5 729 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 WHAMMQ8TF30 809 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 PLIN2Q99541 437 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 MMP17Q9ULZ9 603 aa12.57□□□□□ -0.4
CDK9-205ENST00000498339 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
CDK9-205ENST00000498339 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 H0Y626 953 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 TAF4O00268 1085 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 PIRO00625 290 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 TNFRSF10BO14763 440 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 TADA3O75528 432 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 TRIM16O95361 564 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 PTGER3P43115 390 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 NCKAP1LP55160 1127 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 CRY1Q16526 586 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 DDR2Q16832 855 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 SV2CQ496J9 727 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 DTHD1Q6ZMT9 781 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 CHCHD4Q8N4Q1 142 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 C4orf32Q8N8J7 132 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 FSIP1Q8NA03 581 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 POLMQ9NP87 494 aaPredicted RBP12.56□□□□□ -0.4
CDK9-205ENST00000498339 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 DERAQ9Y315 318 aa12.56□□□□□ -0.4
CDK9-205ENST00000498339 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
CDK9-205ENST00000498339 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 EIF4E1BA6NMX2 242 aaKnown RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 K7EQS6 105 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 FAM189A1O60320 539 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 OPHN1O60890 802 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 TIE1P35590 1138 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 P2RY2P41231 377 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 DPP6P42658 865 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 ACOT2P49753 483 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 ANAPC15P60006 121 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 RPL10AP62906 217 aaKnown RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 NFE2Q16621 373 aaPredicted RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 CCDC83Q8IWF9 413 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 ALLCQ8N6M5 410 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 ARL14EPQ8N8R7 260 aaPredicted RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
CDK9-205ENST00000498339 TXNDC5Q8NBS9 432 aaKnown RBP12.55□□□□□ -0.4
CDK9-205ENST00000498339 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms