RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CTNNA1P35221 906 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 OR3A2P47893 321 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ADKP55263 362 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SIK1P57059 783 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ST5P78524 1137 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NUCB1Q02818 461 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TRAF1Q13077 416 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CAMK4Q16566 473 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PRTGQ2VWP7 1150 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SOWAHCQ53LP3 525 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PYDC2Q56P42 97 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ZRANB3Q5FWF4 1079 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TMEM67Q5HYA8 995 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NOMO2Q5JPE7 1267 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MFSD4BQ5TF39 518 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KRT39Q6A163 491 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TMC5Q6UXY8 1006 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PRRT2Q7Z6L0 340 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 MAB21L3Q8N8X9 362 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 IQUBQ8NA54 791 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 APPL2Q8NEU8 664 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NPLOC4Q8TAT6 608 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PHYHIPQ92561 330 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SEMA4DQ92854 862 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 THOC3Q96J01 351 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 COX4I2Q96KJ9 171 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 IL12RB2Q99665 862 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RUSC1Q9BVN2 902 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TEX13AQ9BXU3 409 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 HIPK3Q9H422 1215 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SEC31BQ9NQW1 1179 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PODXL2Q9NZ53 605 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PCDHGA11Q9Y5H2 935 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CASKIN1Q8WXD9 1431 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SPG11Q96JI7 2443 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KIF26BQ2KJY2 2108 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ASTN2O75129 1339 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 CCDC141Q6ZP82 1450 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FAM92AA1XBS5 289 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DYTNA2CJ06 578 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LRRC37A2A6NM11 1700 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C1QTNF9BB2RNN3 333 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 H0Y858 1186 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 M0R082 166 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EREGO14944 169 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EFSO43281 561 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MGRN1O60291 552 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CRTAPO75718 401 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 LCA5LO95447 670 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TGDSO95455 350 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ITGB1P05556 798 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PLS3P13797 630 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ABOP16442 354 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GUCY2CP25092 1073 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NOVP48745 357 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ADCY7P51828 1080 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SATB1Q01826 763 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NEXNQ0ZGT2 675 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ZNF74Q16587 644 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DUOXA2Q1HG44 320 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 HKDC1Q2TB90 917 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C4orf48Q5BLP8 95 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 HES3Q5TGS1 186 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MZT2AQ6P582 158 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C15orf39Q6ZRI6 1047 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 OTOAQ7RTW8 1153 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GGNQ86UU5 652 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBFAQ8N0V3 343 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C17orf53Q8N3J3 647 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 C11orf44Q8N8P7 122 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TEX19Q8NA77 164 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GANCQ8TET4 914 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NSMCE1Q8WV22 266 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 POF1BQ8WVV4 589 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FIG4Q92562 907 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 HSH2DQ96JZ2 352 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MIPEPQ99797 713 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GINS4Q9BRT9 223 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FNDC11Q9BVV2 318 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LRRC3Q9BY71 257 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RNF208Q9H0X6 261 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NOX4Q9NPH5 578 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TLR9Q9NR96 1032 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C9orf78Q9NZ63 289 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PPARGC1AQ9UBK2 798 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 NUP50Q9UKX7 468 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PADI4Q9UM07 663 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 USP22Q9UPT9 525 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RIMS2Q9UQ26 1411 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SLC9A8Q9Y2E8 581 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SBF1O95248 1867 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SYCE3A1L190 88 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CIDEAO60543 219 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 UGDHO60701 494 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 WNT11O96014 354 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PGK2P07205 417 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ZNF24P17028 368 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PTMSP20962 102 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DNASE1P24855 282 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms