RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 DDX47Q9H0S4 455 aaKnown RBP18.79■□□□□ 0.6
CHRNA4-206ENST00000498043 UBN1Q9NPG3 1134 aa18.79■□□□□ 0.6
CHRNA4-206ENST00000498043 ZNF446Q9NWS9 450 aa18.79■□□□□ 0.6
CHRNA4-206ENST00000498043 WBP1LQ9NX94 342 aa18.79■□□□□ 0.6
CHRNA4-206ENST00000498043 DMGDHQ9UI17 866 aaKnown RBP18.79■□□□□ 0.6
CHRNA4-206ENST00000498043 CCDC151A5D8V7 595 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 RFC1P35251 1148 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 GABRB2P47870 512 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 CDR1P51861 262 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 GSCP56915 257 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 BFSP2Q13515 415 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 BRD3Q15059 726 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 FAM102AQ5T9C2 384 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 ARHGAP17Q68EM7 881 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 CC2D1AQ6P1N0 951 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 WDR93Q6P2C0 686 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 TMCO3Q6UWJ1 677 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 DSTYKQ6XUX3 929 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 SLC24A5Q71RS6 500 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 CRYBG2Q8N1P7 616 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 EMC1Q8N766 993 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 B3GALNT2Q8NCR0 500 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 SLC2A14Q8TDB8 520 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 HASPINQ8TF76 798 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 NAP1L3Q99457 506 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 WDR35Q9P2L0 1181 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 NR2E1Q9Y466 385 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 TIMM13Q9Y5L4 95 aaPredicted RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 TANC1Q9C0D5 1861 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 F8VP50 259 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 I3L4J1 428 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 NBNO60934 754 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 ATP2C2O75185 946 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 TCF4P15884 667 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 LLGL1Q15334 1064 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 PMF1Q6P1K2 205 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 FAM183BPQ6ZVS7 135 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 UBE2Q2Q8WVN8 375 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 TNIP3Q96KP6 325 aa18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHRNA4-206ENST00000498043 SIGLEC16A6NMB1 481 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 PSTPIP1O43586 416 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 TKTP29401 623 aaKnown RBP18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 TUSC3Q13454 348 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 RHOT1Q8IXI2 618 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 MCRS1Q96EZ8 462 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 DDX27Q96GQ7 796 aaKnown RBP18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 PIWIL1Q96J94 861 aaKnown RBP18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 SEZ6LQ9BYH1 1024 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 DNAI2Q9GZS0 605 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 STIM2Q9P246 746 aa18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.77■□□□□ 0.6
CHRNA4-206ENST00000498043 CCDC188H7C350 402 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 RAD51CO43502 376 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 B3GAT3O94766 335 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 PSMA2P25787 234 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 BCAT1P54687 386 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 CLLU1OSQ5K130 101 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 GLB1LQ6UWU2 654 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 GSPT2Q8IYD1 628 aaKnown RBP18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 KLHL11Q9NVR0 708 aa18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 DDX43Q9NXZ2 648 aaKnown RBP18.77■□□□□ 0.59
CHRNA4-206ENST00000498043 GOLGA6L10A0A0M3HER8 536 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 GABRDO14764 452 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 BST2Q10589 180 aaKnown RBP18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 GPNMBQ14956 572 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 KCTD19Q17RG1 926 aaPredicted RBP18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 TIGD5Q53EQ6 642 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 SLC35F5Q8WV83 523 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 SCN5AQ14524 2016 aa18.76■□□□□ 0.59
CHRNA4-206ENST00000498043 TCRBV7S2A1N4TA0A589 114 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 ZSCAN5CA6NGD5 496 aaPredicted RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 HEXIM1O94992 359 aaKnown RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 TUBBP07437 444 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 SETSIPP0DME0 302 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 HSPA6P17066 643 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 PIGHQ14442 188 aaPredicted RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 CLUL1Q15846 466 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 GLE1Q53GS7 698 aaKnown RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 KIAA0319Q5VV43 1072 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 ANKRD52Q8NB46 1076 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 DBF4BQ8NFT6 615 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 PLVAPQ9BX97 442 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 LCMT1Q9UIC8 334 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 F8W810 466 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 PITPNM1O00562 1244 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 SART1O43290 800 aaKnown RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 B4GALT3O60512 393 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 ERLIN1O75477 346 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 GRAP2O75791 330 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 EOMESO95936 686 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 MCM3P25205 808 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 BRCC3P46736 316 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 AARSP49588 968 aaKnown RBP eCLIP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms