RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CBWD6Q4V339 395 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 PABPC1LQ4VXU2 614 aaKnown RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CBWD3Q5JTY5 395 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CBWD5Q5RIA9 395 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 FAM171BQ6P995 826 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SCARA5Q6ZMJ2 495 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 GET4Q7L5D6 327 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 TRIM59Q8IWR1 403 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 ZDHHC14Q8IZN3 488 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 ELMOD1Q8N336 334 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 ELMO3Q96BJ8 720 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 ACSF2Q96CM8 615 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 PI4K2AQ9BTU6 479 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SRRTQ9BXP5 876 aaKnown RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SDCBP2Q9H190 292 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CRTAC1Q9NQ79 661 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 AVENQ9NQS1 362 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 ABI2Q9NYB9 513 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 CEP72Q9P209 647 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 DNMT3BQ9UBC3 853 aaKnown RBP12.01□□□□□ -0.49
ERCC8-208ENST00000497892 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 GTF3C4Q9UKN8 822 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 PCDHB5Q9Y5E4 795 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 PCDHB3Q9Y5E6 796 aa12.01□□□□□ -0.49
ERCC8-208ENST00000497892 MYBPHLA2RUH7 354 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 ATP2C2O75185 946 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 SOAT2O75908 522 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 RHOP08100 348 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 HAPLN1P10915 354 aaPredicted RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 PTPN2P17706 415 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 ATF6P18850 670 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 ERCC5P28715 1186 aaPredicted RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 RAP1GAPP47736 663 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 ALDH1A3P47895 512 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 TUFMP49411 452 aaKnown RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 EPHB3P54753 998 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 EPHA5P54756 1037 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 LAPTM4AQ15012 233 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 MAPRE1Q15691 268 aaKnown RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 SLC5A9Q2M3M2 681 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 MGAT5BQ3V5L5 792 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 Q6ZNB5 142 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 RNF135Q8IUD6 432 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 LEMD2Q8NC56 503 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 CCDC150Q8NCX0 1101 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 SEMA4DQ92854 862 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 MYLPFQ96A32 169 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 FUBP3Q96I24 572 aaKnown RBP eCLIP12□□□□□ -0.49
ERCC8-208ENST00000497892 MYADMQ96S97 322 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 BCO2Q9BYV7 579 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
ERCC8-208ENST00000497892 RAB20Q9NX57 234 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.49
ERCC8-208ENST00000497892 OBSL1O75147 1896 aa12□□□□□ -0.49
ERCC8-208ENST00000497892 A8MXQ7 604 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 PMM2O15305 246 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 LRRN2O75325 713 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 PDGFRBP09619 1106 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CCDC192P0DO97 292 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 GBP2P32456 591 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 FMO5P49326 533 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CDR1P51861 262 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CDH8P55286 799 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 INCA1Q0VD86 236 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CT47A1Q5JQC4 288 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 PRSS36Q5K4E3 855 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 IQCEQ6IPM2 695 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 TMC8Q8IU68 726 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 B3GALNT2Q8NCR0 500 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 MYCBPAPQ8TBZ2 947 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 FGF13Q92913 245 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 PSMG2Q969U7 264 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 PCED1BQ96HM7 432 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 FAXDC2Q96IV6 333 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CNOT6LQ96LI5 555 aaKnown RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 ZNF512Q96ME7 567 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CORO1BQ9BR76 489 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 DPEP3Q9H4B8 488 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CYP3A43Q9HB55 503 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 ASAH2Q9NR71 780 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 EPS15L1Q9UBC2 864 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 CDH7Q9ULB5 785 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 ASB3Q9Y575 518 aa11.99□□□□□ -0.49
ERCC8-208ENST00000497892 ZFP37Q9Y6Q3 630 aaPredicted RBP11.99□□□□□ -0.49
ERCC8-208ENST00000497892 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms