RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 GPR17Q13304 367 aa21.32■■□□□ 1
CTSD-206ENST00000497544 DRAP1Q14919 205 aaPredicted RBP21.32■■□□□ 1
CTSD-206ENST00000497544 DUSP6Q16828 381 aa21.32■■□□□ 1
CTSD-206ENST00000497544 SLC39A12Q504Y0 691 aa21.32■■□□□ 1
CTSD-206ENST00000497544 CACNA2D4Q7Z3S7 1137 aa21.32■■□□□ 1
CTSD-206ENST00000497544 LRRTM3Q86VH5 581 aa21.32■■□□□ 1
CTSD-206ENST00000497544 CRYBG2Q8N1P7 616 aa21.32■■□□□ 1
CTSD-206ENST00000497544 B3GALNT2Q8NCR0 500 aa21.32■■□□□ 1
CTSD-206ENST00000497544 ZNF461Q8TAF7 563 aa21.32■■□□□ 1
CTSD-206ENST00000497544 WHAMMQ8TF30 809 aa21.32■■□□□ 1
CTSD-206ENST00000497544 TMEM176AQ96HP8 235 aa21.32■■□□□ 1
CTSD-206ENST00000497544 HEXIM2Q96MH2 286 aaKnown RBP21.32■■□□□ 1
CTSD-206ENST00000497544 STK33Q9BYT3 514 aa21.32■■□□□ 1
CTSD-206ENST00000497544 NLRC4Q9NPP4 1024 aa21.32■■□□□ 1
CTSD-206ENST00000497544 WDR27A2RRH5 827 aa21.31■■□□□ 1
CTSD-206ENST00000497544 AP5Z1O43299 807 aa21.31■■□□□ 1
CTSD-206ENST00000497544 GLUD1P00367 558 aa21.31■■□□□ 1
CTSD-206ENST00000497544 ACO1P21399 889 aaKnown RBP21.31■■□□□ 1
CTSD-206ENST00000497544 ID4P47928 161 aa21.31■■□□□ 1
CTSD-206ENST00000497544 ORC1Q13415 861 aa21.31■■□□□ 1
CTSD-206ENST00000497544 NFE2Q16621 373 aaPredicted RBP21.31■■□□□ 1
CTSD-206ENST00000497544 TPGS2Q68CL5 300 aa21.31■■□□□ 1
CTSD-206ENST00000497544 FAM171BQ6P995 826 aa21.31■■□□□ 1
CTSD-206ENST00000497544 RNF19BQ6ZMZ0 732 aa21.31■■□□□ 1
CTSD-206ENST00000497544 TRIM67Q6ZTA4 783 aa21.31■■□□□ 1
CTSD-206ENST00000497544 UBR7Q8N806 425 aa21.31■■□□□ 1
CTSD-206ENST00000497544 PABPC5Q96DU9 382 aaKnown RBP21.31■■□□□ 1
CTSD-206ENST00000497544 SPAG5Q96R06 1193 aa21.31■■□□□ 1
CTSD-206ENST00000497544 TWNKQ96RR1 684 aa21.31■■□□□ 1
CTSD-206ENST00000497544 ELOVL4Q9GZR5 314 aa21.31■■□□□ 1
CTSD-206ENST00000497544 DPEP3Q9H4B8 488 aa21.31■■□□□ 1
CTSD-206ENST00000497544 CRTAC1Q9NQ79 661 aa21.31■■□□□ 1
CTSD-206ENST00000497544 HMGXB4Q9UGU5 601 aa21.31■■□□□ 1
CTSD-206ENST00000497544 MTCL1Q9Y4B5 1905 aaKnown RBP21.3■■□□□ 1
CTSD-206ENST00000497544 FSD2A1L4K1 749 aa21.3■■□□□ 1
CTSD-206ENST00000497544 MYBPHLA2RUH7 354 aa21.3■■□□□ 1
CTSD-206ENST00000497544 GOLGA6L3A6NEY3 463 aa21.3■■□□□ 1
CTSD-206ENST00000497544 FOXN3O00409 490 aaPredicted RBP21.3■■□□□ 1
CTSD-206ENST00000497544 EPHB6O15197 1021 aa21.3■■□□□ 1
CTSD-206ENST00000497544 TGM5O43548 720 aa21.3■■□□□ 1
CTSD-206ENST00000497544 ABLIM3O94929 683 aa21.3■■□□□ 1
CTSD-206ENST00000497544 C1RP00736 705 aa21.3■■□□□ 1
CTSD-206ENST00000497544 PBX1P40424 430 aa21.3■■□□□ 1
CTSD-206ENST00000497544 CLCN4P51793 760 aa21.3■■□□□ 1
CTSD-206ENST00000497544 RAD23BP54727 409 aa21.3■■□□□ 1
CTSD-206ENST00000497544 COL19A1Q14993 1142 aa21.3■■□□□ 1
CTSD-206ENST00000497544 MDH1BQ5I0G3 518 aa21.3■■□□□ 1
CTSD-206ENST00000497544 SMYD5Q6GMV2 418 aa21.3■■□□□ 1
CTSD-206ENST00000497544 RBBP8NLQ8NC74 664 aaPredicted RBP21.3■■□□□ 1
CTSD-206ENST00000497544 SHC3Q92529 594 aa21.3■■□□□ 1
CTSD-206ENST00000497544 PGLYRP2Q96PD5 576 aa21.3■■□□□ 1
CTSD-206ENST00000497544 NAA15Q9BXJ9 866 aaKnown RBP21.3■■□□□ 1
CTSD-206ENST00000497544 CEP72Q9P209 647 aa21.3■■□□□ 1
CTSD-206ENST00000497544 AFF4Q9UHB7 1163 aaKnown RBP21.3■■□□□ 1
CTSD-206ENST00000497544 AJAP1Q9UKB5 411 aaPredicted RBP21.3■■□□□ 1
CTSD-206ENST00000497544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.3■■□□□ 1
CTSD-206ENST00000497544 RNF225M0QZC1 329 aaPredicted RBP21.29■■□□□ 1
CTSD-206ENST00000497544 NCK2O43639 380 aa21.29■■□□□ 1
CTSD-206ENST00000497544 SPATA31D3P0C874 917 aa21.29■■□□□ 1
CTSD-206ENST00000497544 ADCY1Q08828 1119 aa21.29■■□□□ 1
CTSD-206ENST00000497544 LILRA6Q6PI73 481 aa21.29■■□□□ 1
CTSD-206ENST00000497544 C4orf50Q6ZRC1 276 aa21.29■■□□□ 1
CTSD-206ENST00000497544 EP400NLQ6ZTU2 488 aa21.29■■□□□ 1
CTSD-206ENST00000497544 SPATA31D4Q6ZUB0 917 aa21.29■■□□□ 1
CTSD-206ENST00000497544 SPATA2LQ8IUW3 424 aaPredicted RBP21.29■■□□□ 1
CTSD-206ENST00000497544 FBXL6Q8N531 539 aa21.29■■□□□ 1
CTSD-206ENST00000497544 SLC4A11Q8NBS3 891 aa21.29■■□□□ 1
CTSD-206ENST00000497544 MYCBPAPQ8TBZ2 947 aa21.29■■□□□ 1
CTSD-206ENST00000497544 C2orf15Q8WU43 125 aaKnown RBP21.29■■□□□ 1
CTSD-206ENST00000497544 SLC22A17Q8WUG5 538 aa21.29■■□□□ 1
CTSD-206ENST00000497544 TMLHEQ9NVH6 421 aa21.29■■□□□ 1
CTSD-206ENST00000497544 DPP7Q9UHL4 492 aa21.29■■□□□ 1
CTSD-206ENST00000497544 KIAA1257Q9ULG3 409 aa21.29■■□□□ 1
CTSD-206ENST00000497544 CNTN6Q9UQ52 1028 aa21.29■■□□□ 1
CTSD-206ENST00000497544 PCDHB5Q9Y5E4 795 aa21.29■■□□□ 1
CTSD-206ENST00000497544 VPS13AQ96RL7 3174 aa21.29■■□□□ 1
CTSD-206ENST00000497544 EPG5Q9HCE0 2579 aa21.28■■□□□ 1
CTSD-206ENST00000497544 PROB1E7EW31 1015 aa21.28■■□□□ 1
CTSD-206ENST00000497544 PAEPP09466 180 aa21.28■■□□□ 1
CTSD-206ENST00000497544 ATF2P15336 505 aa21.28■■□□□ 1
CTSD-206ENST00000497544 CD19P15391 556 aa21.28■■□□□ 1
CTSD-206ENST00000497544 GTF2F1P35269 517 aaKnown RBP eCLIP21.28■■□□□ 1
CTSD-206ENST00000497544 STAT1P42224 750 aa21.28■■□□□ 1
CTSD-206ENST00000497544 ZNF75DP51815 510 aa21.28■■□□□ 1
CTSD-206ENST00000497544 CDR1P51861 262 aa21.28■■□□□ 1
CTSD-206ENST00000497544 VCPP55072 806 aaKnown RBP21.28■■□□□ 1
CTSD-206ENST00000497544 CYP27A1Q02318 531 aa21.28■■□□□ 1
CTSD-206ENST00000497544 HYAL1Q12794 435 aa21.28■■□□□ 1
CTSD-206ENST00000497544 LLGL2Q6P1M3 1020 aa21.28■■□□□ 1
CTSD-206ENST00000497544 ELMSAN1Q6PJG2 1045 aa21.28■■□□□ 1
CTSD-206ENST00000497544 ATAD1Q8NBU5 361 aa21.28■■□□□ 1
CTSD-206ENST00000497544 KREMEN2Q8NCW0 462 aa21.28■■□□□ 1
CTSD-206ENST00000497544 SPPL2BQ8TCT7 592 aa21.28■■□□□ 1
CTSD-206ENST00000497544 IQCDQ96DY2 449 aa21.28■■□□□ 1
CTSD-206ENST00000497544 CYFIP2Q96F07 1278 aa21.28■■□□□ 1
CTSD-206ENST00000497544 PKMYT1Q99640 499 aa21.28■■□□□ 1
CTSD-206ENST00000497544 LPIN3Q9BQK8 851 aa21.28■■□□□ 1
CTSD-206ENST00000497544 MED10Q9BTT4 135 aa21.28■■□□□ 1
CTSD-206ENST00000497544 EDEM3Q9BZQ6 932 aa21.28■■□□□ 1
CTSD-206ENST00000497544 CYP4F11Q9HBI6 524 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms