RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 DLG3Q92796 817 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 ATP6V0A1Q93050 837 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 ZSCAN31Q96LW9 406 aaPredicted RBP3.43□□□□□ -1.86
SHTN1-206ENST00000497044 UROC1Q96N76 676 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 FOXQ1Q9C009 403 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 UPF2Q9HAU5 1272 aaKnown RBP3.43□□□□□ -1.86
SHTN1-206ENST00000497044 TPCN1Q9ULQ1 816 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 BACE2Q9Y5Z0 518 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 CNTNAP5Q8WYK1 1306 aa3.43□□□□□ -1.86
SHTN1-206ENST00000497044 TECTAO75443 2155 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 RFXAPO00287 272 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 NFIBO00712 420 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PPP1R11O60927 126 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 RPS6KA5O75582 802 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ARIH2O95376 493 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 UBA1P22314 1058 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 DNAJB1P25685 340 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SLC16A2P36021 539 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ADCY7P51828 1080 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PHC1P78364 1004 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ELAVL2Q12926 359 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PFKFB3Q16875 520 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 RTP2Q5QGT7 225 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 FAM160B1Q5W0V3 765 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SPEM1Q8N4L4 309 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CYP2W1Q8TAV3 490 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PIGSQ96S52 555 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PSTPIP2Q9H939 334 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ATP6V0A4Q9HBG4 840 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 HOMER2Q9NSB8 354 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 BARHL2Q9NY43 387 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SNX14Q9Y5W7 946 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 VWA8A3KMH1 1905 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 KAT6AQ92794 2004 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 KLF18A0A0U1RQI7 1052 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ASAP2O43150 1006 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SLC26A4O43511 780 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SIGLEC6O43699 453 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 RGS9O75916 674 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 DEXIO95424 95 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 EPHX1P07099 455 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 GCFC2P16383 781 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 IRX6P78412 446 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ZNF200P98182 395 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 BYSLQ13895 437 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 LETM2Q2VYF4 491 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PPM1JQ5JR12 505 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 FOXR1Q6PIV2 292 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 DEFB128Q7Z7B8 93 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 C12orf40Q86WS4 652 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 JAKMIP1Q96N16 626 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 LLPHQ9BRT6 129 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 UBA5Q9GZZ9 404 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ZMYND12Q9H0C1 365 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SEMA6CQ9H3T2 930 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 JADE2Q9NQC1 790 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CHST7Q9NS84 486 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 TMEFF2Q9UIK5 374 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 OBSL1O75147 1896 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 TRAV20A0A0B4J274 112 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 A0A0U1RQF3 1178 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 GABRDO14764 452 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ZRANB2O95218 330 aaKnown RBP eCLIP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CFBP00751 764 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SOD2P04179 222 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 KCNA2P16389 499 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 DDX6P26196 483 aaKnown RBP eCLIP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 NOS3P29474 1203 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CIITAP33076 1130 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SREBF1P36956 1147 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 USP11P51784 963 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 NAPAP54920 295 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 GSTM4Q03013 218 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SSRP1Q08945 709 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PLD1Q13393 1074 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 FZD5Q13467 585 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PTPAQ15257 358 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 USH1GQ495M9 461 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 DCLRE1AQ6PJP8 1040 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PRR23CQ6ZRP0 262 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CCDC149Q6ZUS6 474 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 RTN4RL1Q86UN2 441 aaPredicted RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.42□□□□□ -1.861e-7■■■■■ 35.5
SHTN1-206ENST00000497044 INTS4Q96HW7 963 aaKnown RBP3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SDF4Q9BRK5 362 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 TRIM55Q9BYV6 548 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 B3GNT4Q9C0J1 378 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 CDH19Q9H159 772 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 IL25Q9H293 177 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 TBC1D17Q9HA65 648 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 LTB4R2Q9NPC1 389 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 INCENPQ9NQS7 918 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 ARHGEF3Q9NR81 526 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 TBC1D22BQ9NU19 505 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 WHRNQ9P202 907 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 PCDHB10Q9UN67 800 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SIT1Q9Y3P8 196 aa3.42□□□□□ -1.86
SHTN1-206ENST00000497044 SRCAPQ6ZRS2 3230 aa3.41□□□□□ -1.86
SHTN1-206ENST00000497044 TRBV23-1A0A0A0MS06 115 aa3.41□□□□□ -1.86
SHTN1-206ENST00000497044 PRR19A6NJB7 356 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms