RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 A0A1W2PQ64 194 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 A0A1W2PQC6 194 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 A0A1W2PQD8 194 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FITM1A5D6W6 292 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TRDMT1O14717 391 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PAX4O43316 350 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ZC3H11AO75152 810 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 APOEP02649 317 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 THEGLP0DJG4 465 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CKBP12277 381 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 HPGDP15428 266 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 XPAP23025 273 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 IL32P24001 234 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TRIM23P36406 574 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PSMC4P43686 418 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CBX5P45973 191 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 AMPHP49418 695 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGDIBP52566 201 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GSTO1P78417 241 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SRSF3P84103 164 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MPP1Q00013 466 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 POU4F1Q01851 419 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GRSF1Q12849 480 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SGCGQ13326 291 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 COL9A2Q14055 689 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MINDY4Q4G0A6 757 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CFAP221Q4G0U5 840 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 RNASEH2BQ5TBB1 312 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TPGS2Q68CL5 300 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 LIN54Q6MZP7 749 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CNNM4Q6P4Q7 775 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 DRICH1Q6PGQ1 229 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC2A7Q6PXP3 512 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ENOSF1Q7L5Y1 443 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 DNAJB7Q7Z6W7 309 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GAS2L3Q86XJ1 694 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC50Q8IVM0 306 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 OXR1Q8N573 874 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SYT8Q8NBV8 401 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 KCNH5Q8NCM2 988 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SHCBP1Q8NEM2 672 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 LEO1Q8WVC0 666 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 RUFY2Q8WXA3 655 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM149B1Q96BN6 582 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SYTL4Q96C24 671 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 C1orf159Q96HA4 380 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CHAMP1Q96JM3 812 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ATP6V1G3Q96LB4 118 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 JAKMIP1Q96N16 626 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ACAP3Q96P50 834 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TSC22D3Q99576 134 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 AIFM2Q9BRQ8 373 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GPATCH1Q9BRR8 931 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM129AQ9BZQ8 928 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MROH8Q9H579 483 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MAN1C1Q9NR34 630 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF277Q9NRM2 450 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 KLHL11Q9NVR0 708 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TEKT2Q9UIF3 430 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CORO1CQ9ULV4 474 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 C15orf41Q9Y2V0 281 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CEP164Q9UPV0 1460 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PTPRCP08575 1304 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 M0R3H8 397 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GABRDO14764 452 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 BIRC5O15392 142 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 MTSS1O43312 755 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 IDH3BO43837 385 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TSPAN9O75954 239 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GLRX3O76003 335 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ABLIM3O94929 683 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 DDX58O95786 925 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ECDO95905 644 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 DNTTP04053 509 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 GSNP06396 782 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PHKG2P15735 406 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 JUNBP17275 347 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 KRT4P19013 534 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 IDUAP35475 653 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ADCY8P40145 1251 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 BCL6P41182 706 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SSTP61278 116 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 IL1RL1Q01638 556 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 SSRP1Q08945 709 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ITGB3BPQ13352 177 aaPredicted RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 BYSLQ13895 437 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 RASGRF1Q13972 1273 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 BCL2A1Q16548 175 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 PTPN21Q16825 1174 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FUT11Q495W5 492 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM209AQ5JX71 171 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 CAVIN1Q6NZI2 390 aaKnown RBP3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 B3GNT6Q6ZMB0 384 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP36Q6ZRI8 547 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 LCNL1Q6ZST4 164 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 TTLL7Q6ZT98 887 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 KRT27Q7Z3Y8 459 aa3.3□□□□□ -1.88
SNRNP48-202ENST00000496946 BNIPLQ7Z465 357 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms