RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 KIF26AQ9ULI4 1882 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-208ENST00000496375 EXTL3O43909 919 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 HUS1O60921 280 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 PRPF40AO75400 957 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 PRPF6O94906 941 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 KRT19P08727 400 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 HMGA1P17096 107 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 ACAT1P24752 427 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 HOXD13P35453 343 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 GPR15P49685 360 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 SNRPFP62306 86 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 TNK2Q07912 1038 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 PUM1Q14671 1186 aaKnown RBP eCLIP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 KMT5BQ4FZB7 885 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 WDR44Q5JSH3 913 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 DGLUCYQ7Z3D6 616 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 TMEM150AQ86TG1 271 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 SPEM1Q8N4L4 309 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 CSGALNACT2Q8N6G5 542 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 CELF5Q8N6W0 485 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 LRRC52Q8N7C0 313 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 GLIS3Q8NEA6 775 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 HPS3Q969F9 1004 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 ACBD6Q9BR61 282 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 MTMR12Q9C0I1 747 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 THG1LQ9NWX6 298 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 DDX43Q9NXZ2 648 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 ITGA11Q9UKX5 1188 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 OBSL1O75147 1896 aa15.44■□□□□ 0.06
CXCL12-208ENST00000496375 ZNF638Q14966 1978 aaKnown RBP15.44■□□□□ 0.06
CXCL12-208ENST00000496375 F11P03951 625 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 RPN1P04843 607 aaKnown RBP15.43■□□□□ 0.06
CXCL12-208ENST00000496375 TMEM191BP0C7N4 346 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 AVPR1AP37288 418 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 NLRP12P59046 1061 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 RBP5P82980 135 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 MYL7Q01449 175 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 PON2Q15165 354 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 DGKKQ5KSL6 1271 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 Q6ZS52 159 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 CMTM8Q8IZV2 173 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 TMEM86AQ8N2M4 240 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 GPD1LQ8N335 351 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 GPR161Q8N6U8 529 aaKnown RBP15.43■□□□□ 0.06
CXCL12-208ENST00000496375 KIAA0895Q8NCT3 520 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 TMEM174Q8WUU8 243 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 SCFD1Q8WVM8 642 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 ZMYM5Q9UJ78 669 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 RAB23Q9ULC3 237 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 MAGED2Q9UNF1 606 aaPredicted RBP15.43■□□□□ 0.06
CXCL12-208ENST00000496375 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
CXCL12-208ENST00000496375 KIAA0391O15091 583 aaKnown RBP15.42■□□□□ 0.06
CXCL12-208ENST00000496375 CSH1P0DML2 217 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 CSH2P0DML3 217 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 CYP2F1P24903 491 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 DDX6P26196 483 aaKnown RBP eCLIP15.42■□□□□ 0.06
CXCL12-208ENST00000496375 DMWDQ09019 674 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 STK4Q13043 487 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 LPAL2Q16609 132 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 DDR2Q16832 855 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 RSPO4Q2I0M5 234 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-208ENST00000496375 ITPRIPL2Q3MIP1 535 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 INTS6LQ5JSJ4 861 aaKnown RBP15.42■□□□□ 0.06
CXCL12-208ENST00000496375 LMBRD2Q68DH5 695 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-208ENST00000496375 TXNDC8Q6A555 127 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 OSTM1Q86WC4 334 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 ADGRF2Q8IZF7 708 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 MAB21L3Q8N8X9 362 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 GBP4Q96PP9 640 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 GKN1Q9NS71 199 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 DLL3Q9NYJ7 618 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 GMEB2Q9UKD1 530 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 GTF3C4Q9UKN8 822 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 CCL26Q9Y258 94 aa15.42■□□□□ 0.06
CXCL12-208ENST00000496375 CHURC1-FNTBB4DL54 471 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 HCRTO43612 131 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 PAPSS2O95340 614 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 FNTBP49356 437 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 CCINQ13939 588 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 CCDC142Q17RM4 750 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 COBLL1Q53SF7 1204 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 PRR23BQ6ZRT6 265 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 TOP6BLQ8N6T0 577 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 MRPS31Q92665 395 aaKnown RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 ANKRD36BP1Q96IX9 119 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 GSDMAQ96QA5 445 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 FAM83CQ9BQN1 747 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms