RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
HLA-A-208ENST00000496081 HDAC7Q8WUI4 952 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 ST7Q9NRC1 585 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 HESX1Q9UBX0 185 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 LCMT1Q9UIC8 334 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 CCDC151A5D8V7 595 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 TULP2O00295 520 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 NBNO60934 754 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 TUBBP07437 444 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 CCDC130P13994 396 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 RFC1P35251 1148 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-208ENST00000496081 AARSP49588 968 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-A-208ENST00000496081 TAS2R40P59535 323 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 TUSC3Q13454 348 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 BRD3Q15059 726 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 C8orf74Q6P047 294 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 PMF1Q6P1K2 205 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 IPO4Q8TEX9 1081 aaKnown RBP17.29■□□□□ 0.36
HLA-A-208ENST00000496081 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
HLA-A-208ENST00000496081 TNIP3Q96KP6 325 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 KRT12Q99456 494 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 FTHL17Q9BXU8 183 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 DNAI2Q9GZS0 605 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 DMGDHQ9UI17 866 aaKnown RBP17.29■□□□□ 0.36
HLA-A-208ENST00000496081 USTQ9Y2C2 406 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 NR2E1Q9Y466 385 aa17.29■□□□□ 0.36
HLA-A-208ENST00000496081 E5RJQ4 531 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 CCDC188H7C350 402 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PDE4CQ08493 712 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 CLUL1Q15846 466 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 SEL1L2Q5TEA6 688 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 ANKRD52Q8NB46 1076 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 B3GALNT2Q8NCR0 500 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 NAP1L3Q99457 506 aaPredicted RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 SLC4A5Q9BY07 1137 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 METTL5Q9NRN9 209 aaKnown RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 F8VP50 259 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PSTPIP1O43586 416 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PQBP1O60828 265 aaKnown RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 ATP2C2O75185 946 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 ZMYND10O75800 440 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 ADORA2BP29275 332 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 RGS7P49802 495 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 SLC7A5Q01650 507 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PIGHQ14442 188 aaPredicted RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 CD300LGQ6UXG3 332 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 RHOT1Q8IXI2 618 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 KLHL7Q8IXQ5 586 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 TMEM86AQ8N2M4 240 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 NIPA2Q8N8Q9 360 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 MCOLN1Q9GZU1 580 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 ZNF446Q9NWS9 450 aa17.28■□□□□ 0.36
HLA-A-208ENST00000496081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
HLA-A-208ENST00000496081 PIK3R2O00459 728 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 B3GAT3O94766 335 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 ACAT1P24752 427 aaKnown RBP17.27■□□□□ 0.35
HLA-A-208ENST00000496081 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.35
HLA-A-208ENST00000496081 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 CLLU1OSQ5K130 101 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 CC2D1AQ6P1N0 951 aaPredicted RBP17.27■□□□□ 0.35
HLA-A-208ENST00000496081 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 ADAT2Q7Z6V5 191 aaKnown RBP17.27■□□□□ 0.35
HLA-A-208ENST00000496081 TMEM110Q86TL2 294 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 EMC1Q8N766 993 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 SLC2A14Q8TDB8 520 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 STK32AQ8WU08 396 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 UROC1Q96N76 676 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 HINFPQ9BQA5 517 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 MIS12Q9H081 205 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 CRISPLD2Q9H0B8 497 aa17.27■□□□□ 0.35
HLA-A-208ENST00000496081 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.35
HLA-A-208ENST00000496081 GABBR2O75899 941 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 TCF4P15884 667 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 PTPN1P18031 435 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 LHX1P48742 406 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 BCAT1P54687 386 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 BST2Q10589 180 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 CCDC142Q17RM4 750 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 PAN2Q504Q3 1202 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 FAM102AQ5T9C2 384 aaPredicted RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 OR6B2Q6IFH4 312 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 FAM183BPQ6ZVS7 135 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 SLC13A5Q86YT5 568 aaPredicted RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 FNIP1Q8TF40 1166 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms