RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 PTPRJQ12913 1337 aa19.75■□□□□ 0.75
CLCNKA-207ENST00000495784 SOBPA7XYQ1 873 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 HCRTO43612 131 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 NOL4O94818 638 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 HSP90AA1P07900 732 aaKnown RBP19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 HOXD13P35453 343 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 PUM1Q14671 1186 aaKnown RBP eCLIP19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 CFAP221Q4G0U5 840 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 DPH6Q7L8W6 267 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 DGLUCYQ7Z3D6 616 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 WDR49Q8IV35 697 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 SCN4BQ8IWT1 228 aa19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 FUBP3Q96I24 572 aaKnown RBP eCLIP19.74■□□□□ 0.75
CLCNKA-207ENST00000495784 DCHS1Q96JQ0 3298 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 RUNX3Q13761 415 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 CCINQ13939 588 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 LPAL2Q16609 132 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 CCDC142Q17RM4 750 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 FOXD4L6Q3SYB3 417 aaPredicted RBP19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 WDR44Q5JSH3 913 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 CNNM4Q6P4Q7 775 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 FOXD4L3Q6VB84 417 aaPredicted RBP19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 PRR23BQ6ZRT6 265 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 EPM2AIP1Q7L775 607 aaPredicted RBP19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 SYNPOQ8N3V7 929 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 RDH13Q8NBN7 331 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 ZNF507Q8TCN5 953 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 SNX21Q969T3 373 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 TRMT2BQ96GJ1 504 aaKnown RBP19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 MYRFLQ96LU7 910 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 C7orf25Q9BPX7 421 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 FAM83CQ9BQN1 747 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 SYT15Q9BQS2 421 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 EBF3Q9H4W6 596 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 MAGEF1Q9HAY2 307 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 TRPC7Q9HCX4 862 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 AGPAT3Q9NRZ7 376 aa19.73■□□□□ 0.75
CLCNKA-207ENST00000495784 DMXL1Q9Y485 3027 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 CHURC1-FNTBB4DL54 471 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 POLR2DO15514 142 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 PAPSS2O95340 614 aaPredicted RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 DLATP10515 647 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 PDIA4P13667 645 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 FNTBP49356 437 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 PSMC1P62191 440 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 MAPRE1Q15691 268 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 SNRNP35Q16560 246 aaKnown RBP19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 TRIM68Q6AZZ1 485 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 FAM171BQ6P995 826 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 HS2ST1Q7LGA3 356 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 HSCBQ8IWL3 235 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 NELFCDQ8IXH7 590 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 FNBP1Q96RU3 617 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 MMS19Q96T76 1030 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 FAM13BQ9NYF5 915 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 CDH9Q9ULB4 789 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 USP18Q9UMW8 372 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 UBE4BO95155 1302 aa19.72■□□□□ 0.75
CLCNKA-207ENST00000495784 TRAV19A0A0A6YYK7 116 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 ATP2C2O75185 946 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 TADA3O75528 432 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 CKMP06732 381 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 TNNI1P19237 187 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 MAGEA11P43364 429 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 ME1P48163 572 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 CYP2J2P51589 502 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 AMPD2Q01433 879 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 DMWDQ09019 674 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 GRSF1Q12849 480 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 SIM2Q14190 667 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 ZNF268Q14587 947 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 PDGFRLQ15198 375 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 RSPO4Q2I0M5 234 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 HEATR6Q6AI08 1181 aaKnown RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 LAIR1Q6GTX8 287 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 UNC13DQ70J99 1090 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 TRAPPC11Q7Z392 1133 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 FSIP1Q8NA03 581 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 TTC16Q8NEE8 873 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 KBTBD7Q8WVZ9 684 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 MYLPFQ96A32 169 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 CCDC127Q96BQ5 260 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 DLL3Q9NYJ7 618 aa19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 MAGEC2Q9UBF1 373 aaPredicted RBP19.71■□□□□ 0.75
CLCNKA-207ENST00000495784 CEP250Q9BV73 2442 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 K7ESF4 209 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 CLIC2O15247 247 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 TGFB1I1O43294 461 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 PDGFRBP09619 1106 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 USP17L7P0C7H9 530 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 ARSAP15289 507 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 WARSP23381 471 aaKnown RBP19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 LMO2P25791 158 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 CNR2P34972 360 aa19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 SNRPFP62306 86 aaKnown RBP19.7■□□□□ 0.74
CLCNKA-207ENST00000495784 CYP27A1Q02318 531 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms