RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 CASP8AP2Q9UKL3 1982 aa5.22□□□□□ -1.57
RBM39-240ENST00000495293 RAD50Q92878 1312 aa5.22□□□□□ -1.57
RBM39-240ENST00000495293 LAMB1P07942 1786 aa5.21□□□□□ -1.57
RBM39-240ENST00000495293 PMS2P1A4D2B8 440 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 MAFO75444 373 aaPredicted RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 PRDM1O75626 825 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 NPTXRO95502 500 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 TTLL1O95922 423 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 FGAP02671 866 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 PCP11498 1178 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 EEF2P13639 858 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 HOXA7P31268 230 aaPredicted RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 PSMC4P43686 418 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 MASP1P48740 699 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 CCNA1P78396 465 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 TFAP4Q01664 338 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ALDH6A1Q02252 535 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 COL10A1Q03692 680 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 TRDNQ13061 729 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 COG2Q14746 738 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 PCBP1Q15365 356 aaKnown RBP eCLIP5.21□□□□□ -1.58
RBM39-240ENST00000495293 TCEA2Q15560 299 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 CCDC178Q5BJE1 867 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 RRP12Q5JTH9 1297 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 TREML2Q5T2D2 321 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ESRP1Q6NXG1 681 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 CC2D1AQ6P1N0 951 aaPredicted RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 FBXO46Q6PJ61 603 aaPredicted RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 C17orf99Q6UX52 265 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ADGRE4PQ86SQ3 457 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ANKRD13CQ8N6S4 541 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 KIAA1958Q8N8K9 716 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 GPRC5AQ8NFJ5 357 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 RAET1EQ8TD07 263 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 RABGGTAQ92696 567 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 COA7Q96BR5 231 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 CLIP3Q96DZ5 547 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 C12orf42Q96LP6 360 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 R3HDMLQ9H3Y0 253 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 GPRC5BQ9NZH0 403 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 B4GALT6Q9UBX8 382 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 CLIP2Q9UDT6 1046 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ISY1Q9ULR0 285 aaKnown RBP5.21□□□□□ -1.58
RBM39-240ENST00000495293 STX8Q9UNK0 236 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 GIT1Q9Y2X7 761 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 TMX2Q9Y320 296 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 ZMYM6O95789 1325 aa5.21□□□□□ -1.58
RBM39-240ENST00000495293 SIPA1L1O43166 1804 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 ROBO3Q96MS0 1386 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 A0A087X1B8 175 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 B4E1Z4 1266 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 TNPO2O14787 897 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 WDR46O15213 610 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 RFPL3O75679 317 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 FLOT1O75955 427 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 PRLP01236 227 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 GSPT1P15170 499 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 ATP2A2P16615 1042 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 VCAM1P19320 739 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 CHMLP26374 656 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 APEX1P27695 318 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 GUCY1A2P33402 732 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 INHBCP55103 352 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 HAND2P61296 217 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 SLC6A3Q01959 620 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 SEPT7Q16181 437 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 FAM110CQ1W6H9 321 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 BMP2KLQ5H9B9 411 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 FAM47AQ5JRC9 791 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 AKNAD1Q5T1N1 836 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 L1TD1Q5T7N2 865 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 VPS53Q5VIR6 699 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 WDR78Q5VTH9 848 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 CATSPERGQ6ZRH7 1159 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 ZNF589Q86UQ0 364 aaPredicted RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 LRRTM3Q86VH5 581 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 IQCA1Q86XH1 822 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 ACER1Q8TDN7 264 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 ESR2Q92731 530 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 NKD2Q969F2 451 aaPredicted RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 ABHD8Q96I13 439 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 P2RX7Q99572 595 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 ELF4Q99607 663 aaPredicted RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 PAGR1Q9BTK6 254 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 KRT23Q9C075 422 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 MS4A5Q9H3V2 200 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 PCIF1Q9H4Z3 704 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 RPAP3Q9H6T3 665 aaPredicted RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 VCPKMTQ9H867 229 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 NYAP2Q9P242 653 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 MAGEC2Q9UBF1 373 aaPredicted RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 ANAPC4Q9UJX5 808 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 SYNPO2Q9UMS6 1093 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 PHIPQ8WWQ0 1821 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 MYPNQ86TC9 1320 aa5.2□□□□□ -1.58
RBM39-240ENST00000495293 DDX60LQ5H9U9 1706 aaKnown RBP5.2□□□□□ -1.58
RBM39-240ENST00000495293 PCNTO95613 3336 aa5.19□□□□□ -1.58
RBM39-240ENST00000495293 A0A1W2PRG0 241 aa5.19□□□□□ -1.58
RBM39-240ENST00000495293 ERICH2A1L162 156 aa5.19□□□□□ -1.58
RBM39-240ENST00000495293 LCHNA4D1U4 455 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms