RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 NR3C1P04150 777 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 NBL1P41271 181 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 AP3M2P53677 418 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
LIMS2-216ENST00000494613 DLG4P78352 724 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 NUCB2P80303 420 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 FCHO2Q0JRZ9 810 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 SCN4BQ8IWT1 228 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 OR6B3Q8NGW1 331 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 CLDN23Q96B33 292 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 FUBP3Q96I24 572 aaKnown RBP eCLIP16.69■□□□□ 0.26
LIMS2-216ENST00000494613 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 OBP2AQ9NY56 170 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
LIMS2-216ENST00000494613 TRAF3IP3Q9Y228 551 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 NME7Q9Y5B8 376 aa16.69■□□□□ 0.26
LIMS2-216ENST00000494613 ARNTLO00327 626 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 NCAM2O15394 837 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 KIF20AO95235 890 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 PTPN1P18031 435 aaKnown RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 BDNFP23560 247 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 MAGEA11P43364 429 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 CDH8P55286 799 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 TNNC1P63316 161 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 KCNB1Q14721 858 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 TDRD10Q5VZ19 366 aaKnown RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 CEP135Q66GS9 1140 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 C4orf50Q6ZRC1 276 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 MYCBPAPQ8TBZ2 947 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 TMC2Q8TDI7 906 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 MYRFLQ96LU7 910 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 GCNAQ96QF7 691 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 BCO2Q9BYV7 579 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 FRMD4BQ9Y2L6 1034 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 MRPS17Q9Y2R5 130 aaKnown RBP16.68■□□□□ 0.26
LIMS2-216ENST00000494613 TSC2P49815 1807 aa16.68■□□□□ 0.26
LIMS2-216ENST00000494613 IKBKBO14920 756 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 NOL4O94818 638 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 VNN1O95497 513 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 TARSP26639 723 aaKnown RBP16.67■□□□□ 0.26
LIMS2-216ENST00000494613 GRIK1P39086 918 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 MLLT6P55198 1093 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-216ENST00000494613 CYP27A1Q02318 531 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 BIRC3Q13489 604 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 FRMD5Q7Z6J6 570 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 MON1AQ86VX9 555 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-216ENST00000494613 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
LIMS2-216ENST00000494613 CSGALNACT1Q8TDX6 532 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 FAM3CQ92520 227 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 ELMO3Q96BJ8 720 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 ZFYVE19Q96K21 471 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 CYP2S1Q96SQ9 504 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 SMG9Q9H0W8 520 aaKnown RBP16.67■□□□□ 0.26
LIMS2-216ENST00000494613 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 ZMYM5Q9UJ78 669 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 CACNA1HO95180 2353 aa16.67■□□□□ 0.26
LIMS2-216ENST00000494613 COL4A3Q01955 1670 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 PRAMEF12O95522 483 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 CCNE1P24864 410 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 ADAM9Q13443 819 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 NCOA4Q13772 614 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 SGSM1Q2NKQ1 1148 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 MDH1BQ5I0G3 518 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 VSTM1Q6UX27 236 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 MAML2Q8IZL2 1156 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 CELF5Q8N6W0 485 aaKnown RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 ENGASEQ8NFI3 743 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 MRPS31Q92665 395 aaKnown RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 TRMT2BQ96GJ1 504 aaKnown RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 PCED1BQ96HM7 432 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 SPATA17Q96L03 361 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 GKN1Q9NS71 199 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 THG1LQ9NWX6 298 aaKnown RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 UXTQ9UBK9 157 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 NDRG2Q9UN36 371 aaKnown RBP16.66■□□□□ 0.26
LIMS2-216ENST00000494613 PIAS3Q9Y6X2 628 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 PIEZO1Q92508 2521 aa16.66■□□□□ 0.26
LIMS2-216ENST00000494613 A8MXQ7 604 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 MAPK13O15264 365 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 GFRA3O60609 400 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 AKAP3O75969 853 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 SP9P0CG40 484 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 DDX6P26196 483 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIMS2-216ENST00000494613 AVPR1AP37288 418 aa16.65■□□□□ 0.26
LIMS2-216ENST00000494613 RPS9P46781 194 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms