RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ZNF518BQ9C0D4 1074 aa7.03□□□□□ -1.28
MSL3-217ENST00000494268 COL20A1Q9P218 1284 aa7.03□□□□□ -1.28
MSL3-217ENST00000494268 SERTAD3Q9UJW9 196 aa7.03□□□□□ -1.28
MSL3-217ENST00000494268 SSX2IPQ9Y2D8 614 aa7.03□□□□□ -1.28
MSL3-217ENST00000494268 ADGRA2Q96PE1 1338 aa7.02□□□□□ -1.28
MSL3-217ENST00000494268 WDR33Q9C0J8 1336 aaKnown RBP7.02□□□□□ -1.28
MSL3-217ENST00000494268 TRIM43BA6NCK2 446 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 APAF1O14727 1248 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 MPPED1O15442 326 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 PQBP1O60828 265 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 ERBB2P04626 1255 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 RPS16P62249 146 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 ITIH3Q06033 890 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 ZNF169Q14929 603 aaPredicted RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 PLA1AQ53H76 456 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 KAZNQ674X7 775 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 OLFML1Q6UWY5 402 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 ZDHHC24Q6UX98 284 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 KSR2Q6VAB6 950 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 TRIM43Q96BQ3 446 aaPredicted RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 NMD3Q96D46 503 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 ALG13Q9NP73 1137 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 GEMIN8Q9NWZ8 242 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 FOXJ2Q9P0K8 574 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 LRIT1Q9P2V4 623 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 DKK3Q9UBP4 350 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 AFF4Q9UHB7 1163 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 NDRG4Q9ULP0 352 aaKnown RBP7.02□□□□□ -1.29
MSL3-217ENST00000494268 SHOC2Q9UQ13 582 aa7.02□□□□□ -1.29
MSL3-217ENST00000494268 RHOBTB3O94955 611 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
MSL3-217ENST00000494268 HMGB1P09429 215 aaKnown RBP7.01□□□□□ -1.29
MSL3-217ENST00000494268 CYP2C9P11712 490 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 TYRP1P17643 537 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 WNT3P56703 355 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 NXPH1P58417 271 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 MYO1EQ12965 1108 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 PTPRRQ15256 657 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 ICE2Q659A1 982 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 RGS7BPQ6MZT1 257 aaPredicted RBP7.01□□□□□ -1.29
MSL3-217ENST00000494268 GAS2L3Q86XJ1 694 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 CCAR1Q8IX12 1150 aaKnown RBP7.01□□□□□ -1.29
MSL3-217ENST00000494268 ACTRT2Q8TDY3 377 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 NELL2Q99435 816 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 KLC4Q9NSK0 619 aa7.01□□□□□ -1.29
MSL3-217ENST00000494268 WDR27A2RRH5 827 aa7□□□□□ -1.29
MSL3-217ENST00000494268 F8W8V4 182 aa7□□□□□ -1.29
MSL3-217ENST00000494268 PYCARD-AS1I3L0S3 204 aa7□□□□□ -1.29
MSL3-217ENST00000494268 MGST3O14880 152 aa7□□□□□ -1.29
MSL3-217ENST00000494268 ELFN1P0C7U0 828 aa7□□□□□ -1.29
MSL3-217ENST00000494268 SLC5A1P13866 664 aa7□□□□□ -1.29
MSL3-217ENST00000494268 TRIM27P14373 513 aa7□□□□□ -1.29
MSL3-217ENST00000494268 CXCR5P32302 372 aa7□□□□□ -1.29
MSL3-217ENST00000494268 PIK3CBP42338 1070 aa7□□□□□ -1.29
MSL3-217ENST00000494268 SIM1P81133 766 aaPredicted RBP7□□□□□ -1.29
MSL3-217ENST00000494268 KRT17Q04695 432 aa7□□□□□ -1.29
MSL3-217ENST00000494268 EIF2B5Q13144 721 aaKnown RBP7□□□□□ -1.29
MSL3-217ENST00000494268 TBCCQ15814 346 aa7□□□□□ -1.29
MSL3-217ENST00000494268 TXNRD1Q16881 649 aa7□□□□□ -1.29
MSL3-217ENST00000494268 SLC44A4Q53GD3 710 aa7□□□□□ -1.29
MSL3-217ENST00000494268 SFRP4Q6FHJ7 346 aaPredicted RBP7□□□□□ -1.29
MSL3-217ENST00000494268 PHKBQ93100 1093 aa7□□□□□ -1.29
MSL3-217ENST00000494268 FKBP10Q96AY3 582 aa7□□□□□ -1.29
MSL3-217ENST00000494268 PDLIM2Q96JY6 352 aa7□□□□□ -1.29
MSL3-217ENST00000494268 STK31Q9BXU1 1019 aa7□□□□□ -1.29
MSL3-217ENST00000494268 NUP62CLQ9H1M0 184 aa7□□□□□ -1.29
MSL3-217ENST00000494268 CXorf36Q9H7Y0 433 aa7□□□□□ -1.29
MSL3-217ENST00000494268 SYNPO2LQ9H987 977 aa7□□□□□ -1.29
MSL3-217ENST00000494268 PRC1O43663 620 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 XRCC6P12956 609 aaKnown RBP eCLIP6.99□□□□□ -1.29
MSL3-217ENST00000494268 DGKEP52429 567 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 MAPK10P53779 464 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 TBX4P57082 545 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 SAFBQ15424 915 aaKnown RBP eCLIP6.99□□□□□ -1.29
MSL3-217ENST00000494268 PTCHD3Q3KNS1 767 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 PEG10Q86TG7 708 aaKnown RBP6.99□□□□□ -1.29
MSL3-217ENST00000494268 KRT78Q8N1N4 520 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 RFKQ969G6 155 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 CCDC136Q96JN2 1154 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 CORO2BQ9UQ03 480 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 SNX13Q9Y5W8 968 aa6.99□□□□□ -1.29
MSL3-217ENST00000494268 KIAA0355O15063 1070 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 CSF1RP07333 972 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 NR2F6P10588 404 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 KCNA3P22001 575 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 PPIFP30405 207 aaKnown RBP6.98□□□□□ -1.29
MSL3-217ENST00000494268 LRPAP1P30533 357 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 RARRES1P49788 294 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 E2F2Q14209 437 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 MGAT5BQ3V5L5 792 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 MAVSQ7Z434 540 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 DTX2Q86UW9 622 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 PJA1Q8NG27 643 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 PPP2R3CQ969Q6 453 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 SPSB4Q96A44 273 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 ST3GAL5Q9UNP4 418 aa6.98□□□□□ -1.29
MSL3-217ENST00000494268 PMM2O15305 246 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 CAND2O75155 1236 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms