RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ADGRF2Q8IZF7 708 aa25.64■■□□□ 1.7
TTC3-224ENST00000494243 SYNPOQ8N3V7 929 aa25.64■■□□□ 1.7
TTC3-224ENST00000494243 TRMT2BQ96GJ1 504 aaKnown RBP25.64■■□□□ 1.7
TTC3-224ENST00000494243 MYRFLQ96LU7 910 aa25.64■■□□□ 1.7
TTC3-224ENST00000494243 BACH2Q9BYV9 841 aa25.64■■□□□ 1.7
TTC3-224ENST00000494243 TRIM9Q9C026 710 aa25.64■■□□□ 1.7
TTC3-224ENST00000494243 DNAH14Q0VDD8 3507 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 SPTLC2O15270 562 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 RUNX3Q13761 415 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 CFAP221Q4G0U5 840 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 TRIM68Q6AZZ1 485 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 LAIR1Q6GTX8 287 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 FAM171BQ6P995 826 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 MRPS31Q92665 395 aaKnown RBP25.63■■□□□ 1.69
TTC3-224ENST00000494243 EBF3Q9H4W6 596 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 GMEB2Q9UKD1 530 aa25.63■■□□□ 1.69
TTC3-224ENST00000494243 ZNF233A6NK53 670 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 PPP6R2O75170 966 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 ATP2C2O75185 946 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 SRSF5Q13243 272 aaKnown RBP25.62■■□□□ 1.69
TTC3-224ENST00000494243 STXBP4Q6ZWJ1 553 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 EPM2AIP1Q7L775 607 aaPredicted RBP25.62■■□□□ 1.69
TTC3-224ENST00000494243 DPH6Q7L8W6 267 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 LONP2Q86WA8 852 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 KBTBD7Q8WVZ9 684 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 HPDLQ96IR7 371 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 ANKRD36BP1Q96IX9 119 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 KIF9Q9HAQ2 790 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 RAB23Q9ULC3 237 aa25.62■■□□□ 1.69
TTC3-224ENST00000494243 LMO2P25791 158 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 PCSK1P29120 753 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 HOXA6P31267 233 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 ZNF268Q14587 947 aaPredicted RBP25.61■■□□□ 1.69
TTC3-224ENST00000494243 TMEM196Q5HYL7 178 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 HEATR6Q6AI08 1181 aaKnown RBP25.61■■□□□ 1.69
TTC3-224ENST00000494243 CNNM4Q6P4Q7 775 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 PKN3Q6P5Z2 889 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 SHC4Q6S5L8 630 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 PRR23BQ6ZRT6 265 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 ZNF507Q8TCN5 953 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 FUBP3Q96I24 572 aaKnown RBP eCLIP25.61■■□□□ 1.69
TTC3-224ENST00000494243 SLC22A12Q96S37 553 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 LRRC27Q9C0I9 530 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 CUEDC2Q9H467 287 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 HSPBP1Q9NZL4 362 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 UXTQ9UBK9 157 aaPredicted RBP25.61■■□□□ 1.69
TTC3-224ENST00000494243 USP18Q9UMW8 372 aa25.61■■□□□ 1.69
TTC3-224ENST00000494243 TRDMT1O14717 391 aaKnown RBP25.6■■□□□ 1.69
TTC3-224ENST00000494243 TGFB1I1O43294 461 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 ARSAP15289 507 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 CNR2P34972 360 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 LMNB2Q03252 620 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 SPEM2Q0P670 501 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 MYO1EQ12965 1108 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 SIM2Q14190 667 aaPredicted RBP25.6■■□□□ 1.69
TTC3-224ENST00000494243 SURF1Q15526 300 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 DUOXA2Q1HG44 320 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 FSTL4Q6MZW2 842 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 SPATA2LQ8IUW3 424 aaPredicted RBP25.6■■□□□ 1.69
TTC3-224ENST00000494243 DHX58Q96C10 678 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 CYP2S1Q96SQ9 504 aa25.6■■□□□ 1.69
TTC3-224ENST00000494243 ZNF638Q14966 1978 aaKnown RBP25.59■■□□□ 1.69
TTC3-224ENST00000494243 PRR5-ARHGAP8B1AHC4 643 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 EIF3DO15371 548 aaKnown RBP eCLIP25.59■■□□□ 1.695e-9■□□□□ 9.8
TTC3-224ENST00000494243 TNNC2P02585 160 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 RETP07949 1114 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 MAGEA11P43364 429 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 ATXN1P54253 815 aaKnown RBP25.59■■□□□ 1.69
TTC3-224ENST00000494243 ARHGAP8P85298 464 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 ZNF396Q96N95 335 aaPredicted RBP25.59■■□□□ 1.69
TTC3-224ENST00000494243 FBRSL1Q9HCM7 1045 aaKnown RBP25.59■■□□□ 1.69
TTC3-224ENST00000494243 CRTAC1Q9NQ79 661 aa25.59■■□□□ 1.69
TTC3-224ENST00000494243 CUTAO60888 179 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 YEATS4O95619 227 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 SDHBP21912 280 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 ASIC1P78348 528 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 EHHADHQ08426 723 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 WDR49Q8IV35 697 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 SCN4BQ8IWT1 228 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 C7orf25Q9BPX7 421 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 SYT15Q9BQS2 421 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 KIAA1586Q9HCI6 787 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 GCNT4Q9P109 453 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 CDH9Q9ULB4 789 aa25.58■■□□□ 1.69
TTC3-224ENST00000494243 PSMC1P62191 440 aaKnown RBP25.57■■□□□ 1.68
TTC3-224ENST00000494243 AMPD3Q01432 767 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 FAM160A1Q05DH4 1040 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 GRSF1Q12849 480 aaKnown RBP eCLIP25.57■■□□□ 1.68
TTC3-224ENST00000494243 FAM26FQ5R3K3 315 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 CC2D1AQ6P1N0 951 aaPredicted RBP25.57■■□□□ 1.68
TTC3-224ENST00000494243 TRAPPC11Q7Z392 1133 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 WDR5BQ86VZ2 330 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 IQUBQ8NA54 791 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 TRPC7Q9HCX4 862 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 AGPAT3Q9NRZ7 376 aa25.57■■□□□ 1.68
TTC3-224ENST00000494243 R3HCC1Q9Y3T6 440 aaKnown RBP25.57■■□□□ 1.68
TTC3-224ENST00000494243 CST3P01034 146 aaPredicted RBP25.56■■□□□ 1.68
TTC3-224ENST00000494243 USP17L7P0C7H9 530 aa25.56■■□□□ 1.68
TTC3-224ENST00000494243 WARSP23381 471 aaKnown RBP25.56■■□□□ 1.68
TTC3-224ENST00000494243 PDGFRLQ15198 375 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms