RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NBPF20Q3BBV1 942 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 TRNP1Q6NT89 227 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 FAM183BPQ6ZVS7 135 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 LIMS2Q7Z4I7 341 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SERINC5Q86VE9 423 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 TTC30AQ86WT1 665 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 IQCKQ8N0W5 287 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 EMC1Q8N766 993 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 LRRC45Q96CN5 670 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PIWIL1Q96J94 861 aaKnown RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 RUFY1Q96T51 708 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 GOLGA2P5Q9HBQ8 144 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 FAM49BQ9NUQ9 324 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SNX24Q9Y343 169 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PTPRDP23468 1912 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 GOLGA8KD6RF30 607 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 E5RJQ4 531 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 PODXLO00592 558 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 DPYSL4O14531 572 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 HCRTO43612 131 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 CD4P01730 458 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 CTSHP09668 335 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 RARBP10826 455 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 FGFR1P11362 822 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 CCND3P30281 292 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 LRPAP1P30533 357 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 RFC1P35251 1148 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 TAF6P49848 677 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 CACNB2Q08289 660 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 ZNF268Q14587 947 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 SOWAHAQ2M3V2 549 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 DEFB115Q30KQ5 88 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 SV2CQ496J9 727 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 ATP13A4Q4VNC1 1196 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 MFSD7Q6UXD7 560 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 UNC93AQ86WB7 457 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 KLHDC9Q8NEP7 349 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 UBA3Q8TBC4 463 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 FBXO25Q8TCJ0 367 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 DPEP3Q9H4B8 488 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 FAM204AQ9H8W3 233 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 XPNPEP3Q9NQH7 507 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 GDAP2Q9NXN4 497 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 DDX56Q9NY93 547 aaKnown RBP11.23□□□□□ -0.61
CLCN6-208ENST00000494028 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 KIAA1257Q9ULG3 409 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 PLAAQ9Y263 795 aa11.23□□□□□ -0.61
CLCN6-208ENST00000494028 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-208ENST00000494028 H0YGN5 161 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 M0QZ92 97 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 TULP2O00295 520 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 OPA1O60313 960 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 KRT3P12035 628 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 IL1R2P27930 398 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 PNPLA4P41247 253 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 CDKN2BP42772 138 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 COPS2P61201 443 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 DMTNQ08495 405 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 NOGQ13253 232 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 SNX1Q13596 522 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
CLCN6-208ENST00000494028 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-208ENST00000494028 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 OLFML1Q6UWY5 402 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 SYDE1Q6ZW31 735 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-208ENST00000494028 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-208ENST00000494028 DPH6Q7L8W6 267 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 ACOT1Q86TX2 421 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
CLCN6-208ENST00000494028 C12orf29Q8N999 325 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms