RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 WHAMMQ8TF30 809 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 AUTS2Q8WXX7 1259 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 CASP10Q92851 521 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 PCED1BQ96HM7 432 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 PANX2Q96RD6 677 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 HNRNPABQ99729 332 aaKnown RBP15.82■□□□□ 0.12
ACTB-213ENST00000493945 CLSTN3Q9BQT9 956 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 PRDM12Q9H4Q4 367 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 DMAP1Q9NPF5 467 aaPredicted RBP15.82■□□□□ 0.12
ACTB-213ENST00000493945 LUC7LQ9NQ29 371 aaKnown RBP15.82■□□□□ 0.12
ACTB-213ENST00000493945 FAM49BQ9NUQ9 324 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 SEPT11Q9NVA2 429 aaKnown RBP15.82■□□□□ 0.12
ACTB-213ENST00000493945 DZANK1Q9NVP4 752 aa15.82■□□□□ 0.12
ACTB-213ENST00000493945 WDR27A2RRH5 827 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 MTMR11A4FU01 709 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 M0QYV0 167 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 LSM8O95777 96 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 LRG1P02750 347 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 RPL17P18621 184 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 PTPRDP23468 1912 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 ADORA2BP29275 332 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 HNRNPH3P31942 346 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.123e-14■■□□□ 11.8
ACTB-213ENST00000493945 CDR2Q01850 454 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 ADCY1Q08828 1119 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 BST2Q10589 180 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 TBX2Q13207 712 aaPredicted RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 TAF12Q16514 161 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 GOLGA7BQ2TAP0 167 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 LCLAT1Q6UWP7 414 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 SPRED2Q7Z698 418 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 ITIH5Q86UX2 942 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 FAM35AQ86V20 835 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 TMEM35BQ8NCS4 154 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 SLC2A14Q8TDB8 520 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 EPS8L1Q8TE68 723 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 IPO4Q8TEX9 1081 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 ZNF606Q8WXB4 792 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 TWNKQ96RR1 684 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 RTP3Q9BQQ7 232 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 ZNF518BQ9C0D4 1074 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 GPR88Q9GZN0 384 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 PNPLA8Q9NP80 782 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 CRTAC1Q9NQ79 661 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 KRT82Q9NSB4 513 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 AJAP1Q9UKB5 411 aaPredicted RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 TSPAN16Q9UKR8 245 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 PCDHGC3Q9UN70 934 aa15.81■□□□□ 0.12
ACTB-213ENST00000493945 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
ACTB-213ENST00000493945 MTCL1Q9Y4B5 1905 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 RANBP2P49792 3224 aaKnown RBP15.81■□□□□ 0.12
ACTB-213ENST00000493945 MYBPHLA2RUH7 354 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 HIDE1A8MVS5 230 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 O00370 1275 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 AP1G2O75843 785 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 ABLIM3O94929 683 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 OR4Q2P0C623 313 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 NPR3P17342 541 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 IGFBP4P22692 258 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 BRD2P25440 801 aaKnown RBP15.8■□□□□ 0.12
ACTB-213ENST00000493945 DNAJB1P25685 340 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 CLCN1P35523 988 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 GRIK1P39086 918 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 CDK17Q00537 523 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 ORC1Q13415 861 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 ARID5BQ14865 1188 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 DUSP6Q16828 381 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 SLC47A2Q86VL8 602 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 TXLNBQ8N3L3 684 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 ANKRD52Q8NB46 1076 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 SEPT5Q99719 369 aaPredicted RBP15.8■□□□□ 0.12
ACTB-213ENST00000493945 CYP4F11Q9HBI6 524 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 FBXW11Q9UKB1 542 aa15.8■□□□□ 0.12
ACTB-213ENST00000493945 SSU72P8A0A1W2PR75 194 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 XYLBO75191 536 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 CCDC130P13994 396 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 POU3F3P20264 500 aaPredicted RBP15.79■□□□□ 0.12
ACTB-213ENST00000493945 HOXA9P31269 272 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 IRS1P35568 1242 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 CYLC1P35663 651 aaPredicted RBP15.79■□□□□ 0.12
ACTB-213ENST00000493945 ACADSBP45954 432 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 NRIP1P48552 1158 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 CLCN4P51793 760 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 EPHB3P54753 998 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 ADKP55263 362 aaKnown RBP15.79■□□□□ 0.12
ACTB-213ENST00000493945 PPM1LQ5SGD2 360 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 PPP1R26Q5T8A7 1209 aaPredicted RBP15.79■□□□□ 0.12
ACTB-213ENST00000493945 CYP26C1Q6V0L0 522 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 RNF19BQ6ZMZ0 732 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 TCEAL8Q8IYN2 117 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 KREMEN2Q8NCW0 462 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 LRCH3Q96II8 777 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 CCDC42Q96M95 316 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 PKMYT1Q99640 499 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms