RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 A8MXQ7 604 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 ATP2C2O75185 946 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 VNN2O95498 520 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 CFHP08603 1231 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 GLULP15104 373 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 WARSP23381 471 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 LMO2P25791 158 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 TUFMP49411 452 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 MXI1P50539 228 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 RSPO4Q2I0M5 234 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 C1orf220Q5T0J3 134 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 KRT39Q6A163 491 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 PDZD4Q76G19 769 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SCN4BQ8IWT1 228 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 ST13P5Q8NFI4 369 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 ITFG1Q8TB96 612 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 SPPL2BQ8TCT7 592 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 MYADMQ96S97 322 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 XYLT2Q9H1B5 865 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 METTL14Q9HCE5 456 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
TRAPPC12-222ENST00000493792 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 MYBPHLA2RUH7 354 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 ZNF197O14709 1029 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 GABRDO14764 452 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 TACC1O75410 805 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 FGFR1OPO95684 399 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 DCNP07585 359 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 HAPLN1P10915 354 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 GTF2H1P32780 548 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 CDH8P55286 799 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 NOP14P78316 857 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 WDR44Q5JSH3 913 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 C4orf50Q6ZRC1 276 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 FILIP1Q7Z7B0 1213 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 ITIH5Q86UX2 942 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 C1orf210Q8IVY1 113 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 MLKLQ8NB16 471 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 GPR152Q8TDT2 470 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 C2orf15Q8WU43 125 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 TAF4BQ92750 862 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 MCRS1Q96EZ8 462 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 LPIN3Q9BQK8 851 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 SRRTQ9BXP5 876 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 CEP72Q9P209 647 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 MAGEC2Q9UBF1 373 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 RWDD2AQ9UIY3 292 aa11.11□□□□□ -0.63
TRAPPC12-222ENST00000493792 STK25O00506 426 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 MBD3O95983 291 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 POU2F2P09086 479 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 GJA1P17302 382 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 CYP2F1P24903 491 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 GPR15P49685 360 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 RPL10AP62906 217 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 ENPEPQ07075 957 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 ORC1Q13415 861 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 MAPRE1Q15691 268 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 DDR2Q16832 855 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 SLC5A9Q2M3M2 681 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 SDHAF4Q5VUM1 108 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 ZC3H3Q8IXZ2 948 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 FGF13Q92913 245 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 MYLPFQ96A32 169 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 MED10Q9BTT4 135 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 NIF3L1Q9GZT8 377 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 DPEP3Q9H4B8 488 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 SLITRK6Q9H5Y7 841 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 DACH1Q9UI36 760 aa11.1□□□□□ -0.63
TRAPPC12-222ENST00000493792 CDH7Q9ULB5 785 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms