RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 MFSD7Q6UXD7 560 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 DNAJB3Q8WWF6 145 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CWC15Q9P013 229 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PDCD11Q14690 1871 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 DOCK3Q8IZD9 2030 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 LIASO43766 372 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 LRCH4O75427 683 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CYP2B6P20813 491 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CYP3A5P20815 502 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PCK1P35558 622 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CDKN2BP42772 138 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CCL14Q16627 93 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TAZQ16635 292 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 FSCN1Q16658 493 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 KRT71Q3SY84 523 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 ZFYVE27Q5T4F4 411 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 SAPCD2Q86UD0 394 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 JOSD2Q8TAC2 188 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 NKD2Q969F2 451 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 METTL5Q9NRN9 209 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 ASNSD1Q9NWL6 643 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 CALCOCO1Q9P1Z2 691 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 RECQL4O94761 1208 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 IRAK1P51617 712 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 SH2D3CQ8N5H7 860 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 STK32AQ8WU08 396 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PGM2Q96G03 612 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PRDM4Q9UKN5 801 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TSPAN16Q9UKR8 245 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 LRRD1A4D1F6 860 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 EIF3HO15372 352 aaKnown RBP eCLIP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 TREHO43280 583 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 DUSP11O75319 330 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 RNF8O76064 485 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 TCF4P15884 667 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 PURAQ00577 322 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ADCY2Q08462 1091 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ORC1Q13415 861 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 HIC1Q14526 733 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 C9orf57Q5W0N0 161 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ARHGAP17Q68EM7 881 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ANKS1BQ7Z6G8 1248 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 NXF3Q9H4D5 531 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 C3orf70A6NLC5 250 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 TP73O15350 636 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 RIPK2O43353 540 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 RPLP2P05387 115 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 KLRC2P26717 231 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ADCY8P40145 1251 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ZNF143P52747 638 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 GNGT1P63211 74 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 LLGL1Q15334 1064 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ATP13A4Q4VNC1 1196 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 LRRC31Q6UY01 552 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ZDHHC17Q8IUH5 632 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 RELL1Q8IUW5 271 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 C7orf31Q8N865 590 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 RAPGEF5Q92565 580 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 CNPY3Q9BT09 278 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ROPN1BQ9BZX4 212 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 ROPN1Q9HAT0 212 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 TJP2Q9UDY2 1190 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 TUBGCP4Q9UGJ1 667 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 SNX9Q9Y5X1 595 aa11.36□□□□□ -0.59
PHACTR4-204ENST00000493669 PI4K2BG5E9Z4 385 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 PIRO00625 290 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 ITGAVP06756 1048 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 FAM163BP0C2L3 166 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 ITGA8P53708 1063 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 FAM102AQ5T9C2 384 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 LENG1Q96BZ8 264 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 TLCD1Q96CP7 247 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 STMN4Q9H169 189 aaPredicted RBP11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 ANAPC5Q9UJX4 755 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 DPYSL4O14531 572 aa11.35□□□□□ -0.59
PHACTR4-204ENST00000493669 DESP17661 470 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms