RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 TNIP3Q96KP6 325 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 CEP295NLQ96MC4 621 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 CEP63Q96MT8 703 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 GBP4Q96PP9 640 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 GCNAQ96QF7 691 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 PKMYT1Q99640 499 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 LPIN3Q9BQK8 851 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 RPP25Q9BUL9 199 aaKnown RBP7.45□□□□□ -1.22
TOP3A-207ENST00000493648 MFSD1Q9H3U5 465 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 SLITRK6Q9H5Y7 841 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 MMRN2Q9H8L6 949 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 ZFP14Q9HCL3 533 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 KIAA1468Q9P260 1216 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 WNT16Q9UBV4 365 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
TOP3A-207ENST00000493648 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
TOP3A-207ENST00000493648 VCANP13611 3396 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TRIM49BA6NDI0 452 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SLC38A8A6NNN8 435 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SOBPA7XYQ1 873 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 GOLGA6L22H0YM25 854 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 STK25O00506 426 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TRIM66O15016 1216 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 HCRTO43612 131 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 NARSO43776 548 aaKnown RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 MOSPD3O75425 235 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 GNA14O95837 355 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 CFHP08603 1231 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 GJA1P17302 382 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 BDNFP23560 247 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ANXA13P27216 316 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 MXI1P50539 228 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 PFKPQ01813 784 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 CCDC40Q4G0X9 1142 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 DCAF17Q5H9S7 520 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 FAM78AQ5JUQ0 283 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TANGO2Q6ICL3 276 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 FOXR2Q6PJQ5 311 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 GAREM2Q75VX8 874 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 FRMD5Q7Z6J6 570 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 UNC93AQ86WB7 457 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ZC3H3Q8IXZ2 948 aaKnown RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 CRYBG2Q8N1P7 616 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TTC39CQ8N584 583 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 FBXL13Q8NEE6 735 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SHKBP1Q8TBC3 707 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ZSCAN18Q8TBC5 510 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 GPR152Q8TDT2 470 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TAS1R2Q8TE23 839 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SMARCD2Q92925 531 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 MYLPFQ96A32 169 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 PCED1BQ96HM7 432 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 FAXDC2Q96IV6 333 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SHDQ96IW2 340 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SPATA17Q96L03 361 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ZSWIM3Q96MP5 696 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ASB16Q96NS5 453 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 KXD1Q9BQD3 176 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TRMT61BQ9BVS5 477 aaKnown RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SMOC2Q9H3U7 446 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SMYD3Q9H7B4 428 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 CYP3A43Q9HB55 503 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TRPV4Q9HBA0 871 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ZNF334Q9HCZ1 680 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 CRTAC1Q9NQ79 661 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 SLC2A4RGQ9NR83 387 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 RAB20Q9NX57 234 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 EHD2Q9NZN4 543 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 UXTQ9UBK9 157 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 MAGED2Q9UNF1 606 aaPredicted RBP7.44□□□□□ -1.22
TOP3A-207ENST00000493648 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 ATP8B3O60423 1300 aa7.44□□□□□ -1.22
TOP3A-207ENST00000493648 TECTAO75443 2155 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 DPYSL4O14531 572 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 NOL4O94818 638 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 F11P03951 625 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 HMGA1P17096 107 aaKnown RBP7.43□□□□□ -1.22
TOP3A-207ENST00000493648 BMP6P22004 513 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 RFX1P22670 979 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
TOP3A-207ENST00000493648 WEE1P30291 646 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 AVPR2P30518 371 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 RAP1GAPP47736 663 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 GPR15P49685 360 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 NDST1P52848 882 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 NLRP12P59046 1061 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 GPC5P78333 572 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 CETN1Q12798 172 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 PAK1Q13153 545 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 SLC44A4Q53GD3 710 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 SDHAF4Q5VUM1 108 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 SPOPLQ6IQ16 392 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 TTI2Q6NXR4 508 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 SCARA5Q6ZMJ2 495 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 ACOT1Q86TX2 421 aa7.43□□□□□ -1.22
TOP3A-207ENST00000493648 MFSD6LQ8IWD5 586 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms