RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 EBF1Q9UH73 591 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 ANAPC1Q9H1A4 1944 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 NUP205Q92621 2012 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 FAM208BQ5VWN6 2430 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 H3BQV1 296 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 RHOBTB1O94844 696 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 CYP2F1P24903 491 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 ADSSP30520 456 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 RPL10AP62906 217 aaKnown RBP23.08■■□□□ 1.29
PFDN4-205ENST00000493356 CREB5Q02930 508 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 GRIN1Q05586 938 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 DMC1Q14565 340 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 PSAPL1Q6NUJ1 521 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 RASSF8Q8NHQ8 419 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 POMGNT1Q8WZA1 660 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 LARP4BQ92615 738 aaKnown RBP23.08■■□□□ 1.29
PFDN4-205ENST00000493356 CD101Q93033 1021 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 ACDQ96AP0 544 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 MYRFLQ96LU7 910 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 SLC22A12Q96S37 553 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 ACBD6Q9BR61 282 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 EDEM2Q9BV94 578 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 TMEM206Q9H813 350 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 TRPC7Q9HCX4 862 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 DUS2Q9NX74 493 aaKnown RBP23.08■■□□□ 1.29
PFDN4-205ENST00000493356 L1RE1Q9UN81 338 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 WNT6Q9Y6F9 365 aa23.08■■□□□ 1.29
PFDN4-205ENST00000493356 BCLAF3A2AJT9 711 aaKnown RBP23.07■■□□□ 1.28
PFDN4-205ENST00000493356 POLR2BP30876 1174 aaKnown RBP23.07■■□□□ 1.28
PFDN4-205ENST00000493356 WNT7BP56706 349 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 USP4Q13107 963 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 ZNF720Q7Z2F6 126 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 ABCA7Q8IZY2 2146 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 TTC16Q8NEE8 873 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 ATP2A3Q93084 1043 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 CYP2S1Q96SQ9 504 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 PKMYT1Q99640 499 aa23.07■■□□□ 1.28
PFDN4-205ENST00000493356 DDX43Q9NXZ2 648 aaKnown RBP23.07■■□□□ 1.28
PFDN4-205ENST00000493356 TRAV19A0A0A6YYK7 116 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 PPP1R37O75864 691 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 CAVIN2O95810 425 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 CKMP06732 381 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 USP17L7P0C7H9 530 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 ACAT1P24752 427 aaKnown RBP23.06■■□□□ 1.28
PFDN4-205ENST00000493356 GJB2P29033 226 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 LONP1P36776 959 aaKnown RBP23.06■■□□□ 1.28
PFDN4-205ENST00000493356 IFNAR2P48551 515 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 TFAMQ00059 246 aaKnown RBP23.06■■□□□ 1.28
PFDN4-205ENST00000493356 PSMD2Q13200 908 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 POSTNQ15063 836 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 EML3Q32P44 896 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 INTS6LQ5JSJ4 861 aaKnown RBP23.06■■□□□ 1.28
PFDN4-205ENST00000493356 SFR1Q86XK3 245 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 C1orf127Q8N9H9 656 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 HVCN1Q96D96 273 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 GTF3C4Q9UKN8 822 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 AGAP1Q9UPQ3 857 aa23.06■■□□□ 1.28
PFDN4-205ENST00000493356 IGF2RP11717 2491 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 C4orf47A7E2U8 309 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 ITGB3P05106 788 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 MYL7Q01449 175 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 CCDC142Q17RM4 750 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 KRI1Q8N9T8 703 aaKnown RBP23.05■■□□□ 1.28
PFDN4-205ENST00000493356 FAM213AQ9BRX8 229 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 HELZP42694 1942 aaKnown RBP23.05■■□□□ 1.28
PFDN4-205ENST00000493356 ZZEF1O43149 2961 aa23.05■■□□□ 1.28
PFDN4-205ENST00000493356 THADAQ6YHU6 1953 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 LNP1A1A4G5 178 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 HUS1O60921 280 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 PROS1P07225 676 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 GBP1P32455 592 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 DDIT3P35638 169 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 NOVA1P51513 510 aaKnown RBP23.04■■□□□ 1.28
PFDN4-205ENST00000493356 DGKEP52429 567 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 KCNA1Q09470 495 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 CFAP221Q4G0U5 840 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 SCARA3Q6AZY7 606 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 BRSK2Q8IWQ3 736 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 TMEM86AQ8N2M4 240 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 ARL14EPQ8N8R7 260 aaPredicted RBP23.04■■□□□ 1.28
PFDN4-205ENST00000493356 ZSWIM2Q8NEG5 633 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 STRA6Q9BX79 667 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 GCNT4Q9P109 453 aa23.04■■□□□ 1.28
PFDN4-205ENST00000493356 GIPC1O14908 333 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 BMP15O95972 392 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 DYMQ7RTS9 669 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 OSTM1Q86WC4 334 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 LRRC52Q8N7C0 313 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 TSTD1Q8NFU3 115 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 CXorf38Q8TB03 319 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 SH3RF2Q8TEC5 729 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 TMX3Q96JJ7 454 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 GDAP2Q9NXN4 497 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 RALYQ9UKM9 306 aaKnown RBP23.03■■□□□ 1.28
PFDN4-205ENST00000493356 INVSQ9Y283 1065 aa23.03■■□□□ 1.28
PFDN4-205ENST00000493356 C2orf78A6NCI8 922 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 TULP1O00294 542 aaPredicted RBP23.02■■□□□ 1.28
PFDN4-205ENST00000493356 HCRTO43612 131 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 NR1H3Q13133 447 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 DAB2IPQ5VWQ8 1189 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms