RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 MAP3K21Q5TCX8 1036 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 FAM160B1Q5W0V3 765 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 FAM205BPQ63HN1 556 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 RINT1Q6NUQ1 792 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 GALNT5Q7Z7M9 940 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 CHD1LQ86WJ1 897 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 NRSN1Q8IZ57 195 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 TDRD7Q8NHU6 1098 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 LPPQ93052 612 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 RSRC1Q96IZ7 334 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 TWNKQ96RR1 684 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 OR10A2Q9H208 303 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 NELFAQ9H3P2 528 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 XPNPEP3Q9NQH7 507 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 KRT84Q9NSB2 600 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 MRPS18AQ9NVS2 196 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 FBXO34Q9NWN3 711 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 DKK4Q9UBT3 224 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 RRP7AQ9Y3A4 280 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 TTLL3Q9Y4R7 772 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 PCDH17O14917 1159 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 CCP110O43303 1012 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 USO1O60763 962 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 RASAL1O95294 804 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 ALAS1P13196 640 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 KRT17Q04695 432 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 UBXN2BQ14CS0 331 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 ZNF827Q17R98 1081 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 CMTM4Q8IZR5 234 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 TIGD1Q96MW7 591 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 ZNF552Q9H707 407 aaPredicted RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 NOD2Q9HC29 1040 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 CA14Q9ULX7 337 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 CAPN11Q9UMQ6 739 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 HPSEQ9Y251 543 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 J3KTA2 159 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 RRP9O43818 475 aaKnown RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 PPP6R2O75170 966 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 PIAS2O75928 621 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 VIPP01282 170 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 AMHP03971 560 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ZNF888P0CJ79 500 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 RPS6KB1P23443 525 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 POLD2P49005 469 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ADCY7P51828 1080 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 NPEPPSP55786 919 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 GRM4Q14833 912 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 MEA1Q16626 185 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 TSTQ16762 297 aaKnown RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 FAM133BQ5BKY9 247 aaKnown RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 AGBL4Q5VU57 503 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 TSHZ3Q63HK5 1081 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ATG16L1Q676U5 607 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 CCDC129Q6ZRS4 1044 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 RAB11FIP2Q7L804 512 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ZNF280BQ86YH2 543 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 SP8Q8IXZ3 490 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 TBC1D15Q8TC07 691 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 NEIL1Q96FI4 390 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 C7orf26Q96N11 449 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 SLC25A32Q9H2D1 315 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 SLC6A15Q9H2J7 730 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ACAD9Q9H845 621 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 ANKEF1Q9NU02 776 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 TMOD4Q9NZQ9 345 aa5.27□□□□□ -1.57
VPS13A-212ENST00000493341 RGS17Q9UGC6 210 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-212ENST00000493341 AQP7P3A6NL99 342 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 E7EVH7 732 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 E9PLN8 166 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 HRKO00198 91 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SPTLC2O15270 562 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 RGS10O43665 173 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 POMCP01189 267 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 ANXA6P08133 673 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CYP2C9P11712 490 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 ITGB5P18084 799 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SPINK2P20155 84 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 VIPR2P41587 438 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 LIMS1P48059 325 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 MAN2A2P49641 1150 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 DRG2P55039 364 aaKnown RBP5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CLRN1P58418 232 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 GPS1Q13098 491 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 IQCB1Q15051 598 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SPECC1Q5M775 1068 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 MFSD4BQ5TF39 518 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 ANKS6Q68DC2 871 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 NFRKBQ6P4R8 1299 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 TMCO3Q6UWJ1 677 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 PDPRQ8NCN5 879 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 KLHL32Q96NJ5 620 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 VKORC1Q9BQB6 163 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 MESP1Q9BRJ9 268 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms