RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MYO10Q9HD67 2058 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 AKR1B15C9JRZ8 316 aaPredicted RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 SYN3O14994 580 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 XYLBO75191 536 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 ZMYND10O75800 440 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 C1RP00736 705 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 KRT9P35527 623 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 STAT1P42224 750 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 AARSP49588 968 aaKnown RBP eCLIP14.3□□□□□ -0.12
MSH6-208ENST00000493177 ADKP55263 362 aaKnown RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 ZBED6P86452 979 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 ZXDAP98168 799 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 MTMR3Q13615 1198 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 SOWAHAQ2M3V2 549 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 TSR1Q2NL82 804 aaKnown RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 VARS2Q5ST30 1063 aaKnown RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 ZNF280DQ6N043 979 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 GET4Q7L5D6 327 aaPredicted RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 ADGRF2Q8IZF7 708 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 SUSD3Q96L08 255 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
MSH6-208ENST00000493177 BCO2Q9BYV7 579 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 PRKD2Q9BZL6 878 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 C11orf16Q9NQ32 467 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 CISHQ9NSE2 258 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 FBXW11Q9UKB1 542 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 DSEQ9UL01 958 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 SORCS3Q9UPU3 1222 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 USTQ9Y2C2 406 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 CLUHO75153 1309 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 TTC28Q96AY4 2481 aa14.3□□□□□ -0.12
MSH6-208ENST00000493177 LRRC53A6NM62 1247 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 F8VZ95 297 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 M0QZQ0 153 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 FOXN3O00409 490 aaPredicted RBP14.29□□□□□ -0.12
MSH6-208ENST00000493177 PNMA6AP0CW24 399 aaPredicted RBP14.29□□□□□ -0.12
MSH6-208ENST00000493177 CPB1P15086 417 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 CCDC173Q0VFZ6 552 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 CTXN3Q4LDR2 81 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 ZNF394Q53GI3 561 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 SFMBT2Q5VUG0 894 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 TMEM270Q6UE05 265 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 TRIM67Q6ZTA4 783 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 DPH6Q7L8W6 267 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 CNGA4Q8IV77 575 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 PDCL2Q8N4E4 241 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 TTC39CQ8N584 583 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 FEZF2Q8TBJ5 459 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 BAP1Q92560 729 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 LIMD1Q9UGP4 676 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 RAPGEFL1Q9UHV5 662 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 BACE2Q9Y5Z0 518 aa14.29□□□□□ -0.12
MSH6-208ENST00000493177 TMEM221A6NGB7 291 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 A8MXQ7 604 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 M0R296 226 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 PRRG1O14668 218 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 CCL16O15467 120 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 ADAM12O43184 909 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 MFAP3LO75121 409 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 TACC1O75410 805 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 GFPT2O94808 682 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 LRG1P02750 347 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 ASGR2P07307 311 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 TYMPP19971 482 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 SOX5P35711 763 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 GNL1P36915 607 aaPredicted RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 NDST1P52848 882 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 JAM2P57087 298 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 ARID5AQ03989 594 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 SIGLEC14Q08ET2 396 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 ORC1Q13415 861 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 RAB33AQ14088 237 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 ASIC2Q16515 512 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 OSTM1Q86WC4 334 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 SUGP1Q8IWZ8 645 aaKnown RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 THEM5Q8N1Q8 247 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 RBBP8NLQ8NC74 664 aaPredicted RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 SHC3Q92529 594 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 PBXIP1Q96AQ6 731 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 NUCKS1Q9H1E3 243 aaKnown RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 WDR6Q9NNW5 1121 aaKnown RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
MSH6-208ENST00000493177 MYO6Q9UM54 1294 aa14.28□□□□□ -0.12
MSH6-208ENST00000493177 CILPO75339 1184 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 PDGFRBP09619 1106 aa14.27□□□□□ -0.13
MSH6-208ENST00000493177 HNRNPA1P09651 372 aaKnown RBP eCLIP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms