RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TRAPPC11Q7Z392 1133 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 LIMS2Q7Z4I7 341 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 C12orf56Q8IXR9 622 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 ZFYVE19Q96K21 471 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 SPATA17Q96L03 361 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 AGPAT3Q9NRZ7 376 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TRAV19A0A0A6YYK7 116 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 PRR5-ARHGAP8B1AHC4 643 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TGFB1I1O43294 461 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TACC1O75410 805 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TDGF1P13385 188 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 WARSP23381 471 aaKnown RBP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 ANXA13P27216 316 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 HOXA6P31267 233 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 HOXD13P35453 343 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 ARHGAP8P85298 464 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 EHHADHQ08426 723 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TRPC3Q13507 836 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 BMT2Q1RMZ1 405 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 RESP18Q5W5W9 173 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TXNDC8Q6A555 127 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 SCN4BQ8IWT1 228 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 USP13Q92995 863 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 HPS3Q969F9 1004 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 SYT15Q9BQS2 421 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 USP25Q9UHP3 1055 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
COL6A1-205ENST00000492851 NCANO14594 1321 aa13.33□□□□□ -0.28
COL6A1-205ENST00000492851 TRIM66O15016 1216 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-205ENST00000492851 EXOC3O60645 756 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 STAU1O95793 577 aaKnown RBP13.32□□□□□ -0.28
COL6A1-205ENST00000492851 MYL1P05976 194 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 DLATP10515 647 aaKnown RBP13.32□□□□□ -0.28
COL6A1-205ENST00000492851 GRIK1P39086 918 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 SOX9P48436 509 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 TNNC1P63316 161 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 CYP24A1Q07973 514 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 NR1H3Q13133 447 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 CCINQ13939 588 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 PON2Q15165 354 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
COL6A1-205ENST00000492851 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 KIAA1958Q8N8K9 716 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 MYCBPAPQ8TBZ2 947 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 TMEM174Q8WUU8 243 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-205ENST00000492851 CCDC127Q96BQ5 260 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
COL6A1-205ENST00000492851 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CCDC163A0A0D9SF12 145 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TRDMT1O14717 391 aaKnown RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 LRP3O75074 770 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 PHACTR2O75167 634 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 KIF20AO95235 890 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CKMP06732 381 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 DRD1P21728 446 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 LMO2P25791 158 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CYP2J2P51589 502 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CDR1P51861 262 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 SATB1Q01826 763 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CYP27A1Q02318 531 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 LMNB2Q03252 620 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TNK2Q07912 1038 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 GAS6Q14393 721 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 KCNB1Q14721 858 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 WDR72Q3MJ13 1102 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 FBXO43Q4G163 708 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-205ENST00000492851 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 DENND5BQ6ZUT9 1274 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
COL6A1-205ENST00000492851 CPA6Q8N4T0 437 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms