RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SPATA2LQ8IUW3 424 aaPredicted RBP18.5■□□□□ 0.55
SGMS1-204ENST00000492601 WDR49Q8IV35 697 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 DCLK2Q8N568 766 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 CELF5Q8N6W0 485 aaKnown RBP18.5■□□□□ 0.55
SGMS1-204ENST00000492601 SPATA18Q8TC71 538 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 CCDC127Q96BQ5 260 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 C8orf33Q9H7E9 229 aaPredicted RBP18.5■□□□□ 0.55
SGMS1-204ENST00000492601 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
SGMS1-204ENST00000492601 ZSCAN32Q9NX65 697 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 CCL26Q9Y258 94 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 PCDHGA2Q9Y5H1 932 aa18.5■□□□□ 0.55
SGMS1-204ENST00000492601 SPAG17Q6Q759 2223 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 SDK1Q7Z5N4 2213 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 LMO2P25791 158 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 CTHP32929 405 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 AVPR1AP37288 418 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 MLLT6P55198 1093 aaPredicted RBP18.49■□□□□ 0.55
SGMS1-204ENST00000492601 RPL10AP62906 217 aaKnown RBP18.49■□□□□ 0.55
SGMS1-204ENST00000492601 ATL3Q6DD88 541 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 HS2ST1Q7LGA3 356 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 TRAPPC11Q7Z392 1133 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 SCN4BQ8IWT1 228 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 KIAA2013Q8IYS2 634 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 XXYLT1Q8NBI6 393 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 KBTBD7Q8WVZ9 684 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 MRPS31Q92665 395 aaKnown RBP18.49■□□□□ 0.55
SGMS1-204ENST00000492601 FNBP1Q96RU3 617 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 MMS19Q96T76 1030 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 THG1LQ9NWX6 298 aaKnown RBP18.49■□□□□ 0.55
SGMS1-204ENST00000492601 SERTAD1Q9UHV2 236 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 CFAP45Q9UL16 551 aa18.49■□□□□ 0.55
SGMS1-204ENST00000492601 MYO16Q9Y6X6 1858 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 PDGFRBP09619 1106 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 CYP24A1Q07973 514 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 PSMD6Q15008 389 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 PON2Q15165 354 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 DPH6Q7L8W6 267 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 LIMS2Q7Z4I7 341 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 RALGPS2Q86X27 583 aaPredicted RBP18.48■□□□□ 0.55
SGMS1-204ENST00000492601 CEP57L1Q8IYX8 460 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 ZBTB44Q8NCP5 570 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 RUBCNQ92622 972 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 NELL1Q92832 810 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 USP13Q92995 863 aaPredicted RBP18.48■□□□□ 0.55
SGMS1-204ENST00000492601 MYLPFQ96A32 169 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 MSANTD3Q96H12 275 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 CGRRF1Q99675 332 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 GKN1Q9NS71 199 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 ZMYM5Q9UJ78 669 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 RCOR1Q9UKL0 485 aa18.48■□□□□ 0.55
SGMS1-204ENST00000492601 MYOFQ9NZM1 2061 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 PVALEFA0A1B0GWK0 134 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 TADA3O75528 432 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 NOL4O94818 638 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 CST3P01034 146 aaPredicted RBP18.47■□□□□ 0.55
SGMS1-204ENST00000492601 DDX6P26196 483 aaKnown RBP eCLIP18.47■□□□□ 0.554e-6■□□□□ 10.2
SGMS1-204ENST00000492601 SATB1Q01826 763 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 LRRC32Q14392 662 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 GAS6Q14393 721 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 ITPRIPL2Q3MIP1 535 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 CFAP221Q4G0U5 840 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 FAM171BQ6P995 826 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 C1orf228Q6PIY5 440 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 MON1AQ86VX9 555 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 FUBP3Q96I24 572 aaKnown RBP eCLIP18.47■□□□□ 0.55
SGMS1-204ENST00000492601 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 TRPC7Q9HCX4 862 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 CRTAC1Q9NQ79 661 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 TDP1Q9NUW8 608 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
SGMS1-204ENST00000492601 CDH9Q9ULB4 789 aa18.47■□□□□ 0.55
SGMS1-204ENST00000492601 DNAH14Q0VDD8 3507 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 LILRB5O75023 590 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 SLFN14P0C7P3 912 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 TDGF1P13385 188 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 WARSP23381 471 aaKnown RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 BDNFP23560 247 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 CCR3P51677 355 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 SNRPFP62306 86 aaKnown RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 BMT2Q1RMZ1 405 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 TRIM68Q6AZZ1 485 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 C4orf50Q6ZRC1 276 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 Q6ZS52 159 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 TTC16Q8NEE8 873 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 RIN3Q8TB24 985 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 ZNF516Q92618 1163 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 TRMT2BQ96GJ1 504 aaKnown RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 MRPL45Q9BRJ2 306 aaKnown RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 IER2Q9BTL4 223 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 GZF1Q9H116 711 aaPredicted RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 EBF3Q9H4W6 596 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 NCDNQ9UBB6 729 aa18.46■□□□□ 0.55
SGMS1-204ENST00000492601 MAGEC2Q9UBF1 373 aaPredicted RBP18.46■□□□□ 0.55
SGMS1-204ENST00000492601 CACNA1AO00555 2505 aa18.45■□□□□ 0.54
SGMS1-204ENST00000492601 ACTN4O43707 911 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms