RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PIK3CAP42336 1068 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 CASP4P49662 377 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 TNNC1P63316 161 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 FCHO2Q0JRZ9 810 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 ADAM9Q13443 819 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 EDRF1Q3B7T1 1238 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 TRAPPC11Q7Z392 1133 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 DNAJB7Q7Z6W7 309 aaPredicted RBP15.72■□□□□ 0.11
SS18L1-205ENST00000492466 ELOA2Q8IYF1 753 aaPredicted RBP15.72■□□□□ 0.11
SS18L1-205ENST00000492466 MMS19Q96T76 1030 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 GPR88Q9GZN0 384 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 CHRDQ9H2X0 955 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 ZSCAN32Q9NX65 697 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 HSFX1Q9UBD0 423 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 CTNND2Q9UQB3 1225 aa15.72■□□□□ 0.11
SS18L1-205ENST00000492466 MRPS17Q9Y2R5 130 aaKnown RBP15.72■□□□□ 0.11
SS18L1-205ENST00000492466 LRRIQ3A6PVS8 624 aaPredicted RBP15.71■□□□□ 0.11
SS18L1-205ENST00000492466 MAN2B1O00754 1011 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 PSMC2P35998 433 aaKnown RBP15.71■□□□□ 0.11
SS18L1-205ENST00000492466 AP3M2P53677 418 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 EPHB3P54753 998 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 MYL7Q01449 175 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 TSPY1Q01534 308 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 PLD1Q13393 1074 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 GAS6Q14393 721 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 WDR44Q5JSH3 913 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 WSCD1Q658N2 575 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 INTS8Q75QN2 995 aaKnown RBP15.71■□□□□ 0.11
SS18L1-205ENST00000492466 GPIHBP1Q8IV16 184 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 ADGRF2Q8IZF7 708 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 FAM3CQ92520 227 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 PSMG2Q969U7 264 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 IMPG2Q9BZV3 1241 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 ZCWPW1Q9H0M4 648 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 NUP62CLQ9H1M0 184 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 DMAC2Q9NW81 257 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 SIX4Q9UIU6 781 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.11
SS18L1-205ENST00000492466 PIAS3Q9Y6X2 628 aa15.71■□□□□ 0.11
SS18L1-205ENST00000492466 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 CHRNB1P11230 501 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 ATF6P18850 670 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 ALDH1A3P47895 512 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 VAMP7P51809 220 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 MLLT6P55198 1093 aaPredicted RBP15.7■□□□□ 0.1
SS18L1-205ENST00000492466 LRRC63Q05C16 580 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 NFIL3Q16649 462 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 ZNF699Q32M78 642 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 SLC39A12Q504Y0 691 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
SS18L1-205ENST00000492466 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 ARID3BQ8IVW6 561 aaPredicted RBP15.7■□□□□ 0.1
SS18L1-205ENST00000492466 TMEM86AQ8N2M4 240 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 SPATA20Q8TB22 786 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 TMC2Q8TDI7 906 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 PARD3BQ8TEW8 1205 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
SS18L1-205ENST00000492466 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 LMAN1LQ9HAT1 526 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 IL21Q9HBE4 155 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 ASB3Q9Y575 518 aa15.7■□□□□ 0.1
SS18L1-205ENST00000492466 LAMA1P25391 3075 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 NCOR2Q9Y618 2525 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 TRIM49BA6NDI0 452 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 ZNF263O14978 683 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 CHADO15335 359 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 AKAP3O75969 853 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 TRIM49P0CI25 452 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 TRIM49CP0CI26 452 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 TGM1P22735 817 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 CDR1P51861 262 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 CCDC40Q4G0X9 1142 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 SCARA3Q6AZY7 606 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 SCARA5Q6ZMJ2 495 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 DCP1BQ8IZD4 617 aaKnown RBP15.69■□□□□ 0.1
SS18L1-205ENST00000492466 PDCL2Q8N4E4 241 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 TRIML1Q8N9V2 468 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 CCDC150Q8NCX0 1101 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 NELFBQ8WX92 580 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 ATRIPQ8WXE1 791 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 E2F7Q96AV8 911 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 DHTKD1Q96HY7 919 aaPredicted RBP15.69■□□□□ 0.1
SS18L1-205ENST00000492466 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 CLSTN2Q9H4D0 955 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 SLITRK6Q9H5Y7 841 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 DDX43Q9NXZ2 648 aaKnown RBP15.69■□□□□ 0.1
SS18L1-205ENST00000492466 DLL3Q9NYJ7 618 aa15.69■□□□□ 0.1
SS18L1-205ENST00000492466 NXF1Q9UBU9 619 aaKnown RBP15.69■□□□□ 0.1
SS18L1-205ENST00000492466 MAPK13O15264 365 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 STX10O60499 249 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 P4HA1P13674 534 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 CCNE1P24864 410 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 GABRR2P28476 465 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 PCSK1P29120 753 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 WEE1P30291 646 aa15.68■□□□□ 0.1
SS18L1-205ENST00000492466 SOX9P48436 509 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms