RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PDXDC1Q6P996 788 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 FOXR1Q6PIV2 292 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 TMC5Q6UXY8 1006 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 FAM114A1Q8IWE2 563 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 RUBCNQ92622 972 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 SELENOOQ9BVL4 669 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 ADAM7Q9H2U9 754 aa10.03□□□□□ -0.8
BRCA1-219ENST00000491747 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-219ENST00000491747 BICDL2A1A5D9 508 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 WDR27A2RRH5 827 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 CALUO43852 315 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TMEM191BP0C7N4 346 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 PPP1R2P41236 205 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TAF6P49848 677 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 CORO7P57737 925 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 ROR1Q01973 937 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 NFIL3Q16649 462 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 CTXN3Q4LDR2 81 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 COBLL1Q53SF7 1204 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 C1orf220Q5T0J3 134 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 SLC8B1Q6J4K2 584 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 WDR49Q8IV35 697 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 KREMEN2Q8NCW0 462 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 FAM76AQ8TAV0 307 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 PARD3BQ8TEW8 1205 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 IQCDQ96DY2 449 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 EEF2KMTQ96G04 330 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 DHTKD1Q96HY7 919 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TMEM209Q96SK2 561 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 UHRF1Q96T88 793 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 CGRRF1Q99675 332 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 TTYH3Q9C0H2 523 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-219ENST00000491747 DZANK1Q9NVP4 752 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 FBXW11Q9UKB1 542 aa10.02□□□□□ -0.8
BRCA1-219ENST00000491747 NOTCH4Q99466 2003 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 CCDC195A0A1B0GUA6 201 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 GOLGA6BA6NDN3 693 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 KPNA7A9QM74 516 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 AKAP3O75969 853 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 OAZ2O95190 189 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 KRT19P08727 400 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 OR4Q2P0C623 313 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 TNNI1P19237 187 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 GGCXP38435 758 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 ARPP19P56211 112 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 CDK17Q00537 523 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-219ENST00000491747 SPA17Q15506 151 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 SURF1Q15526 300 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 DUOXA2Q1HG44 320 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 TTI2Q6NXR4 508 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 TRIM58Q8NG06 486 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 IPO4Q8TEX9 1081 aaKnown RBP10.02□□□□□ -0.81
BRCA1-219ENST00000491747 SECISBP2LQ93073 1101 aaKnown RBP10.02□□□□□ -0.81
BRCA1-219ENST00000491747 ZNF707Q96C28 371 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-219ENST00000491747 ANKRD36BP1Q96IX9 119 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 RTP3Q9BQQ7 232 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 SFXN1Q9H9B4 322 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 ITGA11Q9UKX5 1188 aa10.02□□□□□ -0.81
BRCA1-219ENST00000491747 MUC3AQ02505 3323 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 GOLGA6CA6NDK9 693 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 DLL1O00548 723 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CYB561D2O14569 222 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ABLIM3O94929 683 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 VNN2O95498 520 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 C1RP00736 705 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CYP11A1P05108 521 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 GOLGA6DP0CG33 693 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 TYMPP19971 482 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 NR2F2P24468 414 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 VAV2P52735 878 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CLDN10P78369 228 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 YWHAHQ04917 246 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ZP2Q05996 745 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ITIH3Q06033 890 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 MYBPC2Q14324 1141 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CBX2Q14781 532 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-219ENST00000491747 FIGNQ5HY92 759 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 WSCD1Q658N2 575 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ANKRD40Q6AI12 368 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 CENPPQ6IPU0 288 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 GPR149Q86SP6 731 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 ELMO3Q96BJ8 720 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-219ENST00000491747 FNBP1Q96RU3 617 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 LACRTQ9GZZ8 138 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 POMKQ9H5K3 350 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 GOLGA6AQ9NYA3 693 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 JRKLQ9Y4A0 524 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 A0A1W2PQJ5 194 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 H7C4K7 107 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 SHOX2O60902 331 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-219ENST00000491747 PAPLNO95428 1278 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 SEC24AO95486 1093 aa10.01□□□□□ -0.81
BRCA1-219ENST00000491747 TNNC2P02585 160 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms