RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PCDHB7Q9Y5E2 793 aa24.13■■□□□ 1.45
USF3-203ENST00000491165 ABHD14A-ACY1A0A1B0GW23 586 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 PFKMP08237 780 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 HPDP32754 393 aaPredicted RBP24.12■■□□□ 1.45
USF3-203ENST00000491165 OR2W6PQ8NHA6 318 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 UBLCP1Q8WVY7 318 aaPredicted RBP24.12■■□□□ 1.45
USF3-203ENST00000491165 PAAF1Q9BRP4 392 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 GPR88Q9GZN0 384 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 DPP3Q9NY33 737 aa24.12■■□□□ 1.45
USF3-203ENST00000491165 P4HA2O15460 535 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 FGGP02679 453 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 PPIGQ13427 754 aaKnown RBP eCLIP24.11■■□□□ 1.45
USF3-203ENST00000491165 TMEM240Q5SV17 173 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 PHLDB3Q6NSJ2 640 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 RPS6KC1Q96S38 1066 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 DERAQ9Y315 318 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 VGLL3A8MV65 326 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 KIAA0754O94854 1291 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 ABCB4P21439 1286 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 PIK3CAP42336 1068 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 MYL6P60660 151 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 NCOA4Q13772 614 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 MICALCLQ6ZW33 695 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 NT5DC4Q86YG4 428 aa24.11■■□□□ 1.45
USF3-203ENST00000491165 ZNF473Q8WTR7 871 aaKnown RBP24.11■■□□□ 1.45
USF3-203ENST00000491165 APOBEC3GQ9HC16 384 aaKnown RBP24.11■■□□□ 1.45
USF3-203ENST00000491165 INPPL1O15357 1258 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 DDX3YO15523 660 aaKnown RBP24.1■■□□□ 1.45
USF3-203ENST00000491165 TNNC2P02585 160 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 THP07101 528 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 KRT19P08727 400 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 POLR2BP30876 1174 aaKnown RBP24.1■■□□□ 1.45
USF3-203ENST00000491165 AP3M2P53677 418 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 TMC3Q7Z5M5 1100 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 NLRP14Q86W24 1093 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 CASD1Q96PB1 797 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 XYLT2Q9H1B5 865 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 UBQLN1Q9UMX0 589 aaKnown RBP24.1■■□□□ 1.45
USF3-203ENST00000491165 CHD9Q3L8U1 2897 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 TNFAIP3P21580 790 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 RFX1P22670 979 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 FLT3P36888 993 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 ZNF280BQ86YH2 543 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 ARHGEF19Q8IW93 802 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 MYCBPAPQ8TBZ2 947 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 TATDN2Q93075 761 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 TOP1MTQ969P6 601 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 NAP1L3Q99457 506 aaPredicted RBP24.1■■□□□ 1.45
USF3-203ENST00000491165 CARD9Q9H257 536 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 UBN1Q9NPG3 1134 aa24.1■■□□□ 1.45
USF3-203ENST00000491165 MYO1FO00160 1098 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 PPP2R5EQ16537 467 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 FAM117BQ6P1L5 589 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 GLB1LQ6UWU2 654 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 NPAS4Q8IUM7 802 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 CCT8L2Q96SF2 557 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 RAB17Q9H0T7 212 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 LRFN2Q9ULH4 789 aa24.09■■□□□ 1.45
USF3-203ENST00000491165 DDHD2O94830 711 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 FGBP02675 491 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 AGBL2Q5U5Z8 902 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 DCAF12L1Q5VU92 463 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 KAT5Q92993 513 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 SEPT11Q9NVA2 429 aaKnown RBP24.08■■□□□ 1.45
USF3-203ENST00000491165 TBC1D13Q9NVG8 400 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 AGAP1Q9UPQ3 857 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 GOLGA6L10A0A0M3HER8 536 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 ANKRD62A6NC57 917 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 CASTOR2A6NHX0 329 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 FAM107AO95990 144 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 SEC24CP53992 1094 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 ARHGAP44Q17R89 818 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 NOMO2Q5JPE7 1267 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 C3orf58Q8NDZ4 430 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 BEST2Q8NFU1 509 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 ARHGEF26Q96DR7 871 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 DPH5Q9H2P9 285 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 NUB1Q9Y5A7 615 aa24.08■■□□□ 1.45
USF3-203ENST00000491165 F8W810 466 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 BAIAP3O94812 1187 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 CLCNKBP51801 687 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 DHX9Q08211 1270 aaKnown RBP24.07■■□□□ 1.44
USF3-203ENST00000491165 CETN1Q12798 172 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 CLUL1Q15846 466 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 C9orf57Q5W0N0 161 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 OTUD6BQ8N6M0 293 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 THAP2Q9H0W7 228 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 ITGA11Q9UKX5 1188 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 ZBBXA8MT70 800 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 E7EVH7 732 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 DGKIO75912 1065 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 ASS1P00966 412 aaKnown RBP24.07■■□□□ 1.44
USF3-203ENST00000491165 GRIK3Q13003 919 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 FAM43BQ6ZT52 329 aaPredicted RBP24.07■■□□□ 1.44
USF3-203ENST00000491165 TRIM51Q9BSJ1 452 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 DNAJB4Q9UDY4 337 aa24.07■■□□□ 1.44
USF3-203ENST00000491165 PIRO00625 290 aa24.06■■□□□ 1.44
USF3-203ENST00000491165 NOP14P78316 857 aaKnown RBP24.06■■□□□ 1.44
USF3-203ENST00000491165 PAN2Q504Q3 1202 aaKnown RBP24.06■■□□□ 1.44
USF3-203ENST00000491165 YTHDF3Q7Z739 585 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms