RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SLC39A12Q504Y0 691 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 PLPP4Q5VZY2 271 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 TPGS2Q68CL5 300 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 TRIM72Q6ZMU5 477 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 ZNF571Q7Z3V5 609 aaPredicted RBP19.76■□□□□ 0.75
MCF2L-230ENST00000491028 FAM35AQ86V20 835 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 LRRTM3Q86VH5 581 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 FUKQ8N0W3 1084 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 MRPL43Q8N983 215 aaKnown RBP19.76■□□□□ 0.75
MCF2L-230ENST00000491028 SPPL2BQ8TCT7 592 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 SLC2A14Q8TDB8 520 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 GDPD5Q8WTR4 605 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 ZSWIM1Q9BR11 485 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 B3GNT5Q9BYG0 378 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 PDCL3Q9H2J4 239 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 TMLHEQ9NVH6 421 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CEP83Q9Y592 693 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CHD9Q3L8U1 2897 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 LAMA2P24043 3122 aaKnown RBP19.76■□□□□ 0.75
MCF2L-230ENST00000491028 C2orf71A6NGG8 1288 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 TEX28O15482 410 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 MMEP08473 750 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 RPL17P18621 184 aaKnown RBP19.75■□□□□ 0.75
MCF2L-230ENST00000491028 TNFAIP3P21580 790 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 ARPP19P56211 112 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 FMO1Q01740 532 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 CYP27A1Q02318 531 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 CCDC142Q17RM4 750 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 GOLGA7BQ2TAP0 167 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 CFAP221Q4G0U5 840 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 TAF3Q5VWG9 929 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 SPATA2LQ8IUW3 424 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-230ENST00000491028 TMEM139Q8IV31 216 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 CCDC170Q8IYT3 715 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 MICAL1Q8TDZ2 1067 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 CHP1Q99653 195 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 LPIN3Q9BQK8 851 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 MED10Q9BTT4 135 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 DEF6Q9H4E7 631 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 ZNF576Q9H609 170 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 ABCB6Q9NP58 842 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 AFF4Q9UHB7 1163 aaKnown RBP19.75■□□□□ 0.75
MCF2L-230ENST00000491028 MAFFQ9ULX9 164 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 PCDHB5Q9Y5E4 795 aa19.75■□□□□ 0.75
MCF2L-230ENST00000491028 WDR27A2RRH5 827 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 MTMR11A4FU01 709 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 EPOPA6NHQ4 379 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 M0QYV0 167 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ADAM12O43184 909 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 MICAL2O94851 1124 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 LSM8O95777 96 aaKnown RBP19.74■□□□□ 0.75
MCF2L-230ENST00000491028 C1RP00736 705 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 PLEKP08567 350 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-230ENST00000491028 CNPP09543 421 aaKnown RBP19.74■□□□□ 0.75
MCF2L-230ENST00000491028 FAM200BP0CF97 657 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 CHRNB2P17787 502 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ADORA2BP29275 332 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 IRS1P35568 1242 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 EIF4A3P38919 411 aaKnown RBP19.74■□□□□ 0.75
MCF2L-230ENST00000491028 BCAT1P54687 386 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 PTPROQ16827 1216 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 PAQR9Q6ZVX9 377 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ANKRD52Q8NB46 1076 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ZNF461Q8TAF7 563 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 OLIG1Q8TAK6 271 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 SMARCD1Q96GM5 515 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 CCDC42Q96M95 316 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 KLHL5Q96PQ7 755 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ZNF518BQ9C0D4 1074 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 LHX5Q9H2C1 402 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 NHEJ1Q9H9Q4 299 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-230ENST00000491028 HSFX1Q9UBD0 423 aa19.74■□□□□ 0.75
MCF2L-230ENST00000491028 ABLIM3O94929 683 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 CYLC1P35663 651 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 MAGEA11P43364 429 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 SLC8A3P57103 927 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 BST2Q10589 180 aaKnown RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 ASTE1Q2TB18 679 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 PKDCCQ504Y2 493 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 PPP1R2P3Q6NXS1 205 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 VSTM1Q6UX27 236 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 RNF19BQ6ZMZ0 732 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 GLYCTKQ8IVS8 523 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 SEPT11Q9NVA2 429 aaKnown RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 ABI2Q9NYB9 513 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-230ENST00000491028 PATJQ8NI35 1801 aa19.73■□□□□ 0.75
MCF2L-230ENST00000491028 HIDE1A8MVS5 230 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 CLDN5O00501 218 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 DDX3XO00571 662 aaKnown RBP eCLIP19.72■□□□□ 0.75
MCF2L-230ENST00000491028 AKR1B10O60218 316 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 AP1G2O75843 785 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 CYP1A1P04798 512 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-230ENST00000491028 ATF2P15336 505 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 NPR3P17342 541 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 PLXNA3P51805 1871 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 KIF11P52732 1056 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 SLC18A3Q16572 532 aa19.72■□□□□ 0.75
MCF2L-230ENST00000491028 TTC30AQ86WT1 665 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms