RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	GRHL1	Q9NZI5	618 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	LGALS13	Q9UHV8	139 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	MROH7	Q68CQ1	1323 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TLDC2	A0PJX2	215 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ARHGEF37	A1IGU5	675 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TISP43	B9A030	160 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	INO80B-WBP1	J3KQ70	363 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	AP3B1	O00203	1094 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ALOX15B	O15296	676 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	LIAS	O43766	372 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	KPNA6	O60684	536 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	VNN1	O95497	513 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	SRGAP2C	P0DJJ0	459 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	RALA	P11233	206 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TAL1	P17542	331 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	NR2C2	P49116	596 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ATP1A2	P50993	1020 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	VCP	P55072	806 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ARL4C	P56559	192 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TFAM	Q00059	246 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PLCB3	Q01970	1234 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	CNTN2	Q02246	1040 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	SP4	Q02446	784 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PDCL	Q13371	301 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TTLL12	Q14166	644 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	SIX1	Q15475	284 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	SEPT7	Q16181	437 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	UAP1	Q16222	522 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	DGKD	Q16760	1214 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	CTC1	Q2NKJ3	1217 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	LACTB2	Q53H82	288 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ZDHHC24	Q6UX98	284 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	MAMDC4	Q6UXC1	1216 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	DPH6	Q7L8W6	267 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TRMT1L	Q7Z2T5	733 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	DEFB132	Q7Z7B7	95 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PALB2	Q86YC2	1186 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	RHPN2	Q8IUC4	686 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	CCNJL	Q8IV13	435 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	GPIHBP1	Q8IV16	184 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TRIM42	Q8IWZ5	723 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PPIL6	Q8IXY8	311 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	HACE1	Q8IYU2	909 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	CRIPAK	Q8N1N5	446 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	MICALL1	Q8N3F8	863 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	LRRC52	Q8N7C0	313 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TEKT4	Q8WW24	435 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	RSAD2	Q8WXG1	361 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TMEM176A	Q96HP8	235 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	C11orf70	Q9BRQ4	267 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	KIFC3	Q9BVG8	833 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	NT5C1A	Q9BXI3	368 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	CELF4	Q9BZC1	486 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TRIM7	Q9C029	511 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ABHD16B	Q9H3Z7	469 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	GOLPH3	Q9H4A6	298 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	BCAS3	Q9H6U6	928 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PPAN	Q9NQ55	473 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	BTBD7	Q9P203	1132 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	HESX1	Q9UBX0	185 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	BARX2	Q9UMQ3	279 aa	Predicted RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	PTPN22	Q9Y2R2	807 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833		Q9Y3F1	56 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	NEU2	Q9Y3R4	380 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	NUB1	Q9Y5A7	615 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	IKBKG	Q9Y6K9	419 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	MYH9	P35579	1960 aa	Known RBP	6.67	□□□□□ -1.34
FN1-223	ENST00000490833	GRIN2D	O15399	1336 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	ADGRA3	Q8IWK6	1321 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	COL4A5	P29400	1685 aa		6.67	□□□□□ -1.34
FN1-223	ENST00000490833	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	APOC4-APOC2	K7ER74	178 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	DNALI1	O14645	258 aa	Predicted RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	TRDMT1	O14717	391 aa	Known RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	MCF2L	O15068	1137 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	FAM189A1	O60320	539 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	ZWINT	O95229	277 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	EGFR	P00533	1210 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	APOC2	P02655	101 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	KRT1	P04264	644 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	ATP5B	P06576	529 aa	Known RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	CYP3A5	P20815	502 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	TGM2	P21980	687 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	PSMA2	P25787	234 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	SLC8A1	P32418	973 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	SKIV2L2	P42285	1042 aa	Known RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	MAGEA4	P43358	317 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF143	P52747	638 aa	Predicted RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	ITGA8	P53708	1063 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	AIF1	P55008	147 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	MYL6	P60660	151 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	PSMC1	P62191	440 aa	Known RBP	6.66	□□□□□ -1.34
FN1-223	ENST00000490833	CDK16	Q00536	496 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	GUCY1A3	Q02108	690 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	INCA1	Q0VD86	236 aa		6.66	□□□□□ -1.34
FN1-223	ENST00000490833	ILF2	Q12905	390 aa	Known RBP	6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms