RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	TUSC3	Q13454	348 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	CCDC149	Q6ZUS6	474 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	GPR149	Q86SP6	731 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	UBALD2	Q8IYN6	164 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	CCDC170	Q8IYT3	715 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	UROC1	Q96N76	676 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	PRRX2	Q99811	253 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	GDAP2	Q9NXN4	497 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	NXF1	Q9UBU9	619 aa	Known RBP	19.36	■□□□□ 0.69
SRM-206	ENST00000490101	POLI	Q9UNA4	740 aa		19.36	■□□□□ 0.69
SRM-206	ENST00000490101	SCN1A	P35498	2009 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	CACNA1H	O95180	2353 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	SOWAHD	A6NJG2	315 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	CLSTN1	O94985	981 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	ADH1A	P07327	375 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	ANXA13	P27216	316 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	TAF6	P49848	677 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	ARID5A	Q03989	594 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	DSC1	Q08554	894 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	TCF15	Q12870	199 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	SV2C	Q496J9	727 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	ZDHHC14	Q8IZN3	488 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	PLCD3	Q8N3E9	789 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	TTC39C	Q8N584	583 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	RABGGTA	Q92696	567 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	B3GALT6	Q96L58	329 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	19.35	■□□□□ 0.69
SRM-206	ENST00000490101	MAN1C1	Q9NR34	630 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	19.35	■□□□□ 0.69
SRM-206	ENST00000490101	PYCARD	Q9ULZ3	195 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	DENND4A	Q7Z401	1863 aa		19.35	■□□□□ 0.69
SRM-206	ENST00000490101	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	19.35	■□□□□ 0.69
SRM-206	ENST00000490101	USP34	Q70CQ2	3546 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	KPNA7	A9QM74	516 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	TEX28	O15482	410 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	CLCN1	P35523	988 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	EIF4A3	P38919	411 aa	Known RBP	19.34	■□□□□ 0.69
SRM-206	ENST00000490101	BPIFB4	P59827	614 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	LILRA4	P59901	499 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	TNNC1	P63316	161 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	RAD9B	Q6WBX8	426 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	LIMS2	Q7Z4I7	341 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	ACSF2	Q96CM8	615 aa	Predicted RBP	19.34	■□□□□ 0.69
SRM-206	ENST00000490101	SDCBP2	Q9H190	292 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	CISH	Q9NSE2	258 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	FAM86C1	Q9NVL1	165 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	UST	Q9Y2C2	406 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	SSX2IP	Q9Y2D8	614 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	PCDHB4	Q9Y5E5	795 aa		19.34	■□□□□ 0.69
SRM-206	ENST00000490101	C2orf16	Q68DN1	1984 aa		19.33	■□□□□ 0.69
SRM-206	ENST00000490101	PLXNA3	P51805	1871 aa		19.33	■□□□□ 0.69
SRM-206	ENST00000490101	PODXL	O00592	558 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	SPTLC1	O15269	473 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	CYP26A1	O43174	497 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	GLUD1	P00367	558 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	PLEK	P08567	350 aa	Predicted RBP	19.33	■□□□□ 0.68
SRM-206	ENST00000490101	FAM163B	P0C2L3	166 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	KRT5	P13647	590 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	CYLC1	P35663	651 aa	Predicted RBP	19.33	■□□□□ 0.68
SRM-206	ENST00000490101	USP8	P40818	1118 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	ZNF132	P52740	706 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	PTK2	Q05397	1052 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	MTF1	Q14872	753 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	UPP1	Q16831	310 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	ASTE1	Q2TB18	679 aa	Predicted RBP	19.33	■□□□□ 0.68
SRM-206	ENST00000490101	TDRD12	Q587J7	1177 aa	Known RBP	19.33	■□□□□ 0.68
SRM-206	ENST00000490101	SCARA5	Q6ZMJ2	495 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	OTOP3	Q7RTS5	596 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	ZSCAN30	Q86W11	494 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	GPIHBP1	Q8IV16	184 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	GLYCTK	Q8IVS8	523 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	CCDC42	Q96M95	316 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	SYT11	Q9BT88	431 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	COLEC11	Q9BWP8	271 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	HAUS4	Q9H6D7	363 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	SMYD3	Q9H7B4	428 aa		19.33	■□□□□ 0.68
SRM-206	ENST00000490101	EPN1	Q9Y6I3	576 aa	Predicted RBP	19.33	■□□□□ 0.68
SRM-206	ENST00000490101	CASTOR2	A6NHX0	329 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	NDUFA10	O95299	355 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	SPATA31D3	P0C874	917 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	AARS	P49588	968 aa	Known RBP eCLIP	19.32	■□□□□ 0.68
SRM-206	ENST00000490101	CLCNKB	P51801	687 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	INCA1	Q0VD86	236 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	KIAA0319	Q5VV43	1072 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	DCLRE1A	Q6PJP8	1040 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	SPATA31D4	Q6ZUB0	917 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	DPH6	Q7L8W6	267 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	ZNF571	Q7Z3V5	609 aa	Predicted RBP	19.32	■□□□□ 0.68
SRM-206	ENST00000490101	PALB2	Q86YC2	1186 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	RNF168	Q8IYW5	571 aa	Predicted RBP	19.32	■□□□□ 0.68
SRM-206	ENST00000490101	RBBP8NL	Q8NC74	664 aa	Predicted RBP	19.32	■□□□□ 0.68
SRM-206	ENST00000490101	KIAA1524	Q8TCG1	905 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	CACNG4	Q9UBN1	327 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	SNX9	Q9Y5X1	595 aa		19.32	■□□□□ 0.68
SRM-206	ENST00000490101	CCDC195	A0A1B0GUA6	201 aa		19.31	■□□□□ 0.68
SRM-206	ENST00000490101	EIF3CL	B5ME19	914 aa	Known RBP	19.31	■□□□□ 0.68
SRM-206	ENST00000490101	TACC1	O75410	805 aa		19.31	■□□□□ 0.68
SRM-206	ENST00000490101	RFPL2	O75678	378 aa		19.31	■□□□□ 0.68
SRM-206	ENST00000490101	EFEMP2	O95967	443 aa		19.31	■□□□□ 0.68
SRM-206	ENST00000490101	CD58	P19256	250 aa		19.31	■□□□□ 0.68

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