RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C1orf228Q6PIY5 440 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 FOXD4L3Q6VB84 417 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 HS2ST1Q7LGA3 356 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 MON1AQ86VX9 555 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 ADGRF2Q8IZF7 708 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 ZBTB44Q8NCP5 570 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 MSANTD3Q96H12 275 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 ANKRD36BP1Q96IX9 119 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 CGRRF1Q99675 332 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 FAM83CQ9BQN1 747 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 CHRDQ9H2X0 955 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 KCTD10Q9H3F6 313 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 ATXN3LQ9H3M9 355 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 VRTNQ9H8Y1 702 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 PRMT8Q9NR22 394 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 ABI2Q9NYB9 513 aaPredicted RBP10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 SERTAD1Q9UHV2 236 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 GTF3C4Q9UKN8 822 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 NME7Q9Y5B8 376 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 VPS13AQ96RL7 3174 aa10.43□□□□□ -0.74
TMEM39A-210ENST00000490099 HCRTO43612 131 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 LILRB5O75023 590 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 ATP2C2O75185 946 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 TNNC2P02585 160 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 KRT19P08727 400 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 TMEM191BP0C7N4 346 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CSH1P0DML2 217 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CSH2P0DML3 217 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 PFKFB1P16118 471 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 ACAT1P24752 427 aaKnown RBP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 AFMP43652 599 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 RPL10AP62906 217 aaKnown RBP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CCDC142Q17RM4 750 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 ARHGAP29Q52LW3 1261 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 ARHGAP15Q53QZ3 475 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 LMBRD2Q68DH5 695 aaPredicted RBP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 VSTM1Q6UX27 236 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 RALGPS2Q86X27 583 aaPredicted RBP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CMTM8Q8IZV2 173 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 SUMF1Q8NBK3 374 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 KIAA0895Q8NCT3 520 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 PLEKHO2Q8TD55 490 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 PARD3BQ8TEW8 1205 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 FAM3CQ92520 227 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 SPATA17Q96L03 361 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 SLITRK6Q9H5Y7 841 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 C8orf33Q9H7E9 229 aaPredicted RBP10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 SLC39A2Q9NP94 309 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CRTAC1Q9NQ79 661 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CDH9Q9ULB4 789 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 PIAS3Q9Y6X2 628 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 MIA3Q5JRA6 1907 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
TMEM39A-210ENST00000490099 DENND4CQ5VZ89 1909 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 A0A1W2PQ27 194 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 A0A1W2PQ64 194 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 A0A1W2PQD8 194 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 PDXKO00764 312 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CLIC2O15247 247 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 TADA3O75528 432 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 C4BPAP04003 597 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 ATICP31939 592 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 GPR15P49685 360 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CYP2J2P51589 502 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CDR1P51861 262 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CYP4F8P98187 520 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 MTAPQ13126 283 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 GAS6Q14393 721 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 ZNF268Q14587 947 aaPredicted RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 MAPRE1Q15691 268 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 DDR2Q16832 855 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 NELFCDQ8IXH7 590 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 GRAMD1CQ8IYS0 662 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 FAM200AQ8TCP9 573 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 BPIFB1Q8TDL5 484 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 USP13Q92995 863 aaPredicted RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CCDC127Q96BQ5 260 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CHFRQ96EP1 664 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 PI4K2AQ9BTU6 479 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 FAM126AQ9BYI3 521 aaPredicted RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 SPATA6Q9NWH7 488 aaPredicted RBP10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 GCNT4Q9P109 453 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 PCDHGA2Q9Y5H1 932 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 R4GN57 208 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 WDR87Q6ZQQ6 2873 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 TCHHQ07283 1943 aa10.41□□□□□ -0.74
TMEM39A-210ENST00000490099 A0A1B0GVL5 298 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 SLC38A8A6NNN8 435 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 SPECC1L-ADORA2AF8WAN1 911 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms