RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 B4GALNT2Q8NHY0 566 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 MAGED4Q96JG8 741 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 LATS2Q9NRM7 1088 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 IMPAD1Q9NX62 359 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 CD274Q9NZQ7 290 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 VGLL3A8MV65 326 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 RBP1P09455 135 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 KCNA3P22001 575 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 SLC11A2P49281 568 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 KDSRQ06136 332 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 CRYMQ14894 314 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 LRRC8DQ7L1W4 858 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 PRPF39Q86UA1 669 aaKnown RBP9.2□□□□□ -0.94
LSAMP-205ENST00000490035 EXD1Q8NHP7 514 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 SRPK1Q96SB4 655 aaKnown RBP9.2□□□□□ -0.94
LSAMP-205ENST00000490035 SYNPO2Q9UMS6 1093 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 PPP2R3BQ9Y5P8 575 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 SLC4A7Q9Y6M7 1214 aa9.2□□□□□ -0.94
LSAMP-205ENST00000490035 STAG3L1P0CL83 205 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 RARGP13631 454 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MYL6P60660 151 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 RAB14P61106 215 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 E2F4Q16254 413 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 BRINP3Q76B58 766 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CYP4Z1Q86W10 505 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 PALB2Q86YC2 1186 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 HPDLQ96IR7 371 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MUC3BQ9H195 1237 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM120BA0PK00 339 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 WEE2P0C1S8 567 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MLNP12872 115 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 VSNL1P62760 191 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM132BQ14DG7 1078 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ZFP1Q6P2D0 407 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 HES6Q96HZ4 224 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 THTPAQ9BU02 230 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SYTL2Q9HCH5 934 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SESN1Q9Y6P5 492 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 AGLP35573 1532 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 NKRFO15226 690 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 VPS4BO75351 444 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 RRM2P31350 389 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 AKT1P31749 480 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 COILP38432 576 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TAF6P49848 677 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CCZ1BP86790 482 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CCZ1P86791 482 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TBX20Q9UMR3 447 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ALG6Q9Y672 507 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MYO10Q9HD67 2058 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ST13P50502 369 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 POU4F1Q01851 419 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 C6orf10Q5SRN2 563 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 KLHL11Q9NVR0 708 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM260Q9NX78 707 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 VTI1BQ9UEU0 232 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ANKRD26Q9UPS8 1709 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ZW10O43264 779 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ALDH1A2O94788 518 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CYP2D6P10635 497 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 NCF4Q15080 339 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ADGRE3Q9BY15 652 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MRPS26Q9BYN8 205 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 YIPF3Q9GZM5 350 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SPATA31A6Q5VVP1 1343 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SDR42E2A6NKP2 422 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ENO3P13929 434 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 AGBL3Q8NEM8 1001 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SRP68Q9UHB9 627 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TRMT6Q9UJA5 497 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 NWD1Q149M9 1564 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MYH11P35749 1972 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CRTAMO95727 393 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 TCF3P15923 654 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CCDC153Q494R4 210 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 KLHDC7AQ5VTJ3 777 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 UCMAQ8WVF2 138 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 CAMKK2Q96RR4 588 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 GPR63Q9BZJ6 419 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 DDX28Q9NUL7 540 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 RBP3P10745 1247 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 GNL1P36915 607 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 SESN2P58004 480 aaPredicted RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 AMPD2Q01433 879 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 OOSP2Q86WS3 158 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF333Q96JL9 665 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 ITGB1BP2Q9UKP3 347 aa9.19□□□□□ -0.94
LSAMP-205ENST00000490035 UBQLN1Q9UMX0 589 aaKnown RBP9.19□□□□□ -0.94
LSAMP-205ENST00000490035 PIK3C2BO00750 1634 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 TGFB3P10600 412 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CETPP11597 493 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms