RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 TRIML1Q8N9V2 468 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 TAS1R2Q8TE23 839 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 TNIP3Q96KP6 325 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 PKMYT1Q99640 499 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 METTL14Q9HCE5 456 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 ZFP14Q9HCL3 533 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 ZNF334Q9HCZ1 680 aaPredicted RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 PTPRDP23468 1912 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 PPP1R3GB7ZBB8 358 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 STK25O00506 426 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 COL9A1P20849 921 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 RFX1P22670 979 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 BDNFP23560 247 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 ANXA13P27216 316 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 CDC25CP30307 473 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 GPR15P49685 360 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 STX17P56962 302 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 PAK1Q13153 545 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 CCDC142Q17RM4 750 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 WDR44Q5JSH3 913 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 SDHAF4Q5VUM1 108 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 VSTM1Q6UX27 236 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 CLEC17AQ6ZS10 378 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 BMP8AQ7Z5Y6 402 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 TMC8Q8IU68 726 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 B3GALNT2Q8NCR0 500 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 FBXL13Q8NEE6 735 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.12
CCL28-202ENST00000489442 SMARCD2Q92925 531 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 ASIC4Q96FT7 647 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 PCED1BQ96HM7 432 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 CEP63Q96MT8 703 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 RPP25Q9BUL9 199 aaKnown RBP14.27□□□□□ -0.12
CCL28-202ENST00000489442 LRRC3Q9BY71 257 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 DNAI2Q9GZS0 605 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 HCN4Q9Y3Q4 1203 aa14.27□□□□□ -0.12
CCL28-202ENST00000489442 DENND4CQ5VZ89 1909 aa14.27□□□□□ -0.13
CCL28-202ENST00000489442 MOSPD3O75425 235 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 ECI2O75521 394 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 MAGEA11P43364 429 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
CCL28-202ENST00000489442 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 GPR158Q5T848 1215 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 GAREM2Q75VX8 874 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 ZC3H3Q8IXZ2 948 aaKnown RBP14.26□□□□□ -0.13
CCL28-202ENST00000489442 FBXL6Q8N531 539 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 ZSWIM3Q96MP5 696 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 ASB16Q96NS5 453 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 DPEP3Q9H4B8 488 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 CLSTN2Q9H4D0 955 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 UXTQ9UBK9 157 aaPredicted RBP14.26□□□□□ -0.13
CCL28-202ENST00000489442 ATP8B3O60423 1300 aa14.26□□□□□ -0.13
CCL28-202ENST00000489442 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 DPYSL4O14531 572 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
CCL28-202ENST00000489442 NDST1P52848 882 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 GPC5P78333 572 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 TTI2Q6NXR4 508 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 FRMD5Q7Z6J6 570 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 ACOT1Q86TX2 421 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 SIX5Q8N196 739 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 ELSPBP1Q96BH3 223 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 DUSP9Q99956 384 aaKnown RBP14.25□□□□□ -0.13
CCL28-202ENST00000489442 ELOVL4Q9GZR5 314 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 NIF3L1Q9GZT8 377 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 NUP62CLQ9H1M0 184 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 CYP3A43Q9HB55 503 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 RAB20Q9NX57 234 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 WNT16Q9UBV4 365 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 CA14Q9ULX7 337 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
CCL28-202ENST00000489442 NRG2O14511 850 aaPredicted RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 TRIM66O15016 1216 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 GNA14O95837 355 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 PDGFBP01127 241 aaPredicted RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 CD58P19256 250 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 VIPR2P41587 438 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 ASPAP45381 313 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 CYP4F8P98187 520 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 PFKPQ01813 784 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 CETN1Q12798 172 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 FOXR2Q6PJQ5 311 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 POTEHQ6S545 545 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 UNC93AQ86WB7 457 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 CREBRFQ8IUR6 639 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 GPIHBP1Q8IV16 184 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms