RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 NOL4O94818 638 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 KRT19P08727 400 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 TMEM191BP0C7N4 346 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 CYP2F1P24903 491 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 RPL10AP62906 217 aaKnown RBP19.78■□□□□ 0.76
HDAC6-231ENST00000488905 ZNF268Q14587 947 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-231ENST00000488905 DDR2Q16832 855 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 CCDC142Q17RM4 750 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 TMEM196Q5HYL7 178 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 MON1AQ86VX9 555 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 WDR5BQ86VZ2 330 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 OSTM1Q86WC4 334 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 ADGRF2Q8IZF7 708 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 TOP6BLQ8N6T0 577 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 TRMT2BQ96GJ1 504 aaKnown RBP19.78■□□□□ 0.76
HDAC6-231ENST00000488905 PCIF1Q9H4Z3 704 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 TMEM206Q9H813 350 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 PDE11AQ9HCR9 933 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 SEMA4GQ9NTN9 838 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 SNX9Q9Y5X1 595 aa19.78■□□□□ 0.76
HDAC6-231ENST00000488905 OTOL1A6NHN0 477 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-231ENST00000488905 PRPF6O94906 941 aaKnown RBP19.77■□□□□ 0.76
HDAC6-231ENST00000488905 HOXC13P31276 330 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 RBP5P82980 135 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC6-231ENST00000488905 SLC39A14Q15043 492 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 CFAP221Q4G0U5 840 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 PKN3Q6P5Z2 889 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 GPD1LQ8N335 351 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 NETO1Q8TDF5 533 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 ANKRD36BP1Q96IX9 119 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 GTF3C4Q9UKN8 822 aa19.77■□□□□ 0.76
HDAC6-231ENST00000488905 TRDMT1O14717 391 aaKnown RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 GABRDO14764 452 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 KIAA0391O15091 583 aaKnown RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 HCRTO43612 131 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 ARSAP15289 507 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 PCSK1P29120 753 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 LHX1P48742 406 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 CSRP2Q16527 193 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 LMBRD2Q68DH5 695 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 CC2D1AQ6P1N0 951 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 PRR23CQ6ZRP0 262 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 CEP68Q76N32 757 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 CCDC65Q8IXS2 484 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 FAM160A2Q8N612 972 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 PDILTQ8N807 584 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 FUBP3Q96I24 572 aaKnown RBP eCLIP19.76■□□□□ 0.75
HDAC6-231ENST00000488905 MYRFLQ96LU7 910 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 PTPRJQ12913 1337 aa19.76■□□□□ 0.75
HDAC6-231ENST00000488905 DCDC2BA2VCK2 349 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 AMPD2Q01433 879 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 FAM160A1Q05DH4 1040 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 USP4Q13107 963 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 MTF1Q14872 753 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 PDGFRLQ15198 375 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 ZNF77Q15935 545 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 SOWAHAQ2M3V2 549 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
HDAC6-231ENST00000488905 TNMDQ9H2S6 317 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 TRPC7Q9HCX4 862 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 INTS13Q9NVM9 706 aa19.75■□□□□ 0.75
HDAC6-231ENST00000488905 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-231ENST00000488905 SLC30A4O14863 429 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 EGFP01133 1207 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 CKMP06732 381 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 NASPP49321 788 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-231ENST00000488905 MYO1EQ12965 1108 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 STXBP4Q6ZWJ1 553 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 GLIS3Q8NEA6 775 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 OR5B17Q8NGF7 314 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 SLC22A12Q96S37 553 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 SYT15Q9BQS2 421 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 ZSCAN16Q9H4T2 348 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-231ENST00000488905 R3HCC1Q9Y3T6 440 aaKnown RBP19.74■□□□□ 0.75
HDAC6-231ENST00000488905 CHD8Q9HCK8 2581 aa19.74■□□□□ 0.75
HDAC6-231ENST00000488905 TRAV19A0A0A6YYK7 116 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 CCDC163A0A0D9SF12 145 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 ATG13O75143 517 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 RNF40O75150 1001 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 TNNC2P02585 160 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 USP17L7P0C7H9 530 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 DRD1P21728 446 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 MAGEA11P43364 429 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 PXNP49023 591 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-231ENST00000488905 PSMC1P62191 440 aaKnown RBP19.73■□□□□ 0.75
HDAC6-231ENST00000488905 FAM171BQ6P995 826 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 DPH6Q7L8W6 267 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 LIMS2Q7Z4I7 341 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 CBWD2Q8IUF1 395 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 SCN4BQ8IWT1 228 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 CPA6Q8N4T0 437 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 OSCP1Q8WVF1 389 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 GAB3Q8WWW8 586 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms