RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 YME1L1Q96TA2 773 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 NT5C1AQ9BXI3 368 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 UBN1Q9NPG3 1134 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 ZNF185O15231 689 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 CALB1P05937 261 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 THP07101 528 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 POU3F3P20264 500 aaPredicted RBP13.47□□□□□ -0.25
NELFE-209ENST00000488426 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
NELFE-209ENST00000488426 MLH1P40692 756 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 PAFAH1B1P43034 410 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 TFF2Q03403 129 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 ITIH3Q06033 890 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 AGMOQ6ZNB7 445 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 UNC93AQ86WB7 457 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 RABGGTAQ92696 567 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 CAPZA3Q96KX2 299 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 ZFP42Q96MM3 310 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 ADAM2Q99965 735 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
NELFE-209ENST00000488426 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
NELFE-209ENST00000488426 FAM170AA1A519 330 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
NELFE-209ENST00000488426 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 RRM1P23921 792 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 CNGA2Q16280 664 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 SGO2Q562F6 1265 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 CCDC181Q5TID7 509 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 DPH6Q7L8W6 267 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 GSTCDQ8NEC7 633 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 TSC1Q92574 1164 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 GAD1Q99259 594 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 RC3H2Q9HBD1 1191 aaKnown RBP13.46□□□□□ -0.25
NELFE-209ENST00000488426 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
NELFE-209ENST00000488426 PACSIN2Q9UNF0 486 aaPredicted RBP13.46□□□□□ -0.25
NELFE-209ENST00000488426 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
NELFE-209ENST00000488426 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
NELFE-209ENST00000488426 COL4A6Q14031 1691 aa13.46□□□□□ -0.25
NELFE-209ENST00000488426 MEIS3P2A8K0S8 358 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 O00370 1275 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 CXCR5P32302 372 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 SSTR3P32745 418 aaPredicted RBP13.46□□□□□ -0.26
NELFE-209ENST00000488426 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.26
NELFE-209ENST00000488426 ELF2Q15723 593 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 TEX35Q5T0J7 233 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 PLEKHA7Q6IQ23 1121 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 MMS22LQ6ZRQ5 1243 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 MSANTD4Q8NCY6 345 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 C1orf131Q8NDD1 294 aaKnown RBP13.46□□□□□ -0.26
NELFE-209ENST00000488426 LPPQ93052 612 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.26
NELFE-209ENST00000488426 PSMB7Q99436 277 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 MRPL45Q9BRJ2 306 aaKnown RBP13.46□□□□□ -0.26
NELFE-209ENST00000488426 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 RSAD1Q9HA92 442 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 GOLGA2P5Q9HBQ8 144 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 RNF19AQ9NV58 838 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 ALG6Q9Y672 507 aa13.46□□□□□ -0.26
NELFE-209ENST00000488426 NCOR1O75376 2440 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 COL4A4P53420 1690 aaPredicted RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 KCNK3O14649 394 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 LILRA4P59901 499 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 MESDQ14696 234 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 DENND1BQ6P3S1 775 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 MTERF4Q7Z6M4 381 aaKnown RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 ERICH1Q86X53 443 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 ECHDC2Q86YB7 292 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 WDTC1Q8N5D0 677 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 TOP6BLQ8N6T0 577 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 APPL2Q8NEU8 664 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 ZNF689Q96CS4 500 aaPredicted RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 FTHL17Q9BXU8 183 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 PARVAQ9NVD7 372 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 ANAPC7Q9UJX3 599 aa13.45□□□□□ -0.26
NELFE-209ENST00000488426 TDRD15B5MCY1 1934 aaKnown RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
NELFE-209ENST00000488426 SPTLC1O15269 473 aa13.44□□□□□ -0.26
NELFE-209ENST00000488426 INPPL1O15357 1258 aa13.44□□□□□ -0.26
NELFE-209ENST00000488426 HUS1O60921 280 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms