RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 JRKLQ9Y4A0 524 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 HYOU1Q9Y4L1 999 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 MRFAP1Q9Y605 127 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PLXNA4Q9HCM2 1894 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 SF3B1O75533 1304 aaKnown RBP eCLIP7.31□□□□□ -1.244e-6■■■■■ 47.1
PDAP1-203ENST00000488214 ABHD14A-ACY1A0A1B0GW23 586 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 E5RJQ4 531 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TULP2O00295 520 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 GABRDO14764 452 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SPOPO43791 374 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SRGAP2O75044 1071 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 ATP2C2O75185 946 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TADA2AO75478 443 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MTA2O94776 668 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 ERBB2P04626 1255 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CYP11A1P05108 521 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PFKMP08237 780 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 FAM200BP0CF97 657 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SETSIPP0DME0 302 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PTPN1P18031 435 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TYMPP19971 482 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PAX3P23760 479 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 GJC1P36383 396 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 HADHBP55084 474 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 WDR5P61964 334 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TSPY1Q01534 308 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PDE4CQ08493 712 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 BST2Q10589 180 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PTP4A2Q12974 167 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 PPIGQ13427 754 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MESDQ14696 234 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 RPS6KA1Q15418 735 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 INTS6LQ5JSJ4 861 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SPOUT1Q5T280 376 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 FAM102AQ5T9C2 384 aaPredicted RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 KIAA0319Q5VV43 1072 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 OVOS1Q6IE37 1185 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 DCUN1D2Q6PH85 259 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CD300LGQ6UXG3 332 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TMCO2Q7Z6W1 182 aaPredicted RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 UBE2Q1Q7Z7E8 422 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CRYBG2Q8N1P7 616 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 WDTC1Q8N5D0 677 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 C3orf20Q8ND61 904 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MNS1Q8NEH6 495 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SPATA18Q8TC71 538 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 VWCEQ96DN2 955 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CAPZA3Q96KX2 299 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CALR3Q96L12 384 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MCEEQ96PE7 176 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM175Q9BSA9 504 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SELENOOQ9BVL4 669 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 L2HGDHQ9H9P8 463 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MRPL47Q9HD33 250 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 IL23AQ9NPF7 189 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 METTL5Q9NRN9 209 aaKnown RBP7.31□□□□□ -1.24
PDAP1-203ENST00000488214 MARCH5Q9NX47 278 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 ADAM28Q9UKQ2 775 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 AMFRQ9UKV5 643 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 CDH9Q9ULB4 789 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 SNX12Q9UMY4 172 aa7.31□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF638Q14966 1978 aaKnown RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 UQCRHLA0A096LP55 91 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 MYBPHLA2RUH7 354 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 NT5C1B-RDH14C9J2C7 533 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CLDN5O00501 218 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 KCNK3O14649 394 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 NRP1O14786 923 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TRAPPC3O43617 180 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 EFCAB14O75071 495 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 AP1G2O75843 785 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 BAIAP3O94812 1187 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 UQCRHP07919 91 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FAM163BP0C2L3 166 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 NPR3P17342 541 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 COMTP21964 271 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 GPD2P43304 727 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 SLC8A3P57103 927 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 YWHAHQ04917 246 aaPredicted RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FPGSQ05932 587 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CKAP4Q07065 602 aaKnown RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 MAMLD1Q13495 774 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TCEAL1Q15170 157 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 WHAMMP3Q1A5X7 153 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 PKDCCQ504Y2 493 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 MEI1Q5TIA1 1274 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CCDC181Q5TID7 509 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 PAPD7Q5XG87 772 aaKnown RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 OR6B2Q6IFH4 312 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 PLEKHA7Q6IQ23 1121 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF280DQ6N043 979 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FUT10Q6P4F1 479 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FAM183BPQ6ZVS7 135 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 OTOP2Q7RTS6 562 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 NT5DC3Q86UY8 548 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM173Q86WV6 379 aaPredicted RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms