RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TEX33O43247 280 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 BEST1O76090 585 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 LRG1P02750 347 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 FAM163BP0C2L3 166 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 ADORA2BP29275 332 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 CBX2Q14781 532 aaPredicted RBP18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 EXOC3L4Q17RC7 722 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 ATAT1Q5SQI0 421 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 TRIM65Q6PJ69 517 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 CCDC149Q6ZUS6 474 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 RNF214Q8ND24 703 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 ING5Q8WYH8 240 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 RPGRIP1Q96KN7 1286 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 ZSWIM1Q9BR11 485 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 CORO1BQ9BR76 489 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 LSM14BQ9BX40 385 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 NAT10Q9H0A0 1025 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 ZDHHC7Q9NXF8 308 aa18.26■□□□□ 0.51
SHROOM1-205ENST00000488072 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 EPHB6O15197 1021 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 PAPLNO95428 1278 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 C1RP00736 705 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 ITIH3Q06033 890 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 ARHGAP44Q17R89 818 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 CES5AQ6NT32 575 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 CRYBG2Q8N1P7 616 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 MYADMQ96S97 322 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 MED10Q9BTT4 135 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 LRRC3Q9BY71 257 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 PCDHB4Q9Y5E5 795 aa18.25■□□□□ 0.51
SHROOM1-205ENST00000488072 C2orf16Q68DN1 1984 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 MOSPD3O75425 235 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 RHOP08100 348 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 USP46P62068 366 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 NFE2Q16621 373 aaPredicted RBP18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 PPP1R26Q5T8A7 1209 aaPredicted RBP18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 IQCEQ6IPM2 695 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 TMEM270Q6UE05 265 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 LRSAM1Q6UWE0 723 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 DNAJB7Q7Z6W7 309 aaPredicted RBP18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 FAM35AQ86V20 835 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 UNC93AQ86WB7 457 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 SPPL2BQ8TCT7 592 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 TFAP2BQ92481 460 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 HEXIM2Q96MH2 286 aaKnown RBP18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 SMOQ99835 787 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 NT5C1AQ9BXI3 368 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 TSPY26PQ9H489 355 aa18.24■□□□□ 0.51
SHROOM1-205ENST00000488072 MTCL1Q9Y4B5 1905 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 SMTNL1A8MU46 457 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 BECN2A8MW95 431 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 C2CD4DB7Z1M9 353 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 F8VP50 259 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 MYL4P12829 197 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 CEBPBP17676 345 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 ALDH1A3P47895 512 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 CETN1Q12798 172 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 PLD1Q13393 1074 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 GET4Q7L5D6 327 aaPredicted RBP18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 ZMIZ2Q8NF64 920 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 TMEM176AQ96HP8 235 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 RIPOR3Q96MK2 946 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 WDR6Q9NNW5 1121 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 FHOD1Q9Y613 1164 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 CLUHO75153 1309 aa18.23■□□□□ 0.51
SHROOM1-205ENST00000488072 NOTCH4Q99466 2003 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 FAM170AA1A519 330 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 LGALS16A8MUM7 142 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 NOL4O94818 638 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 CFHP08603 1231 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 HMGA1P17096 107 aaKnown RBP18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 HOXA9P31269 272 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 GRIK1P39086 918 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 MTHFRP42898 656 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 SYCP1Q15431 976 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 TJAP1Q5JTD0 557 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 STXBP5Q5T5C0 1151 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 KLHDC7AQ5VTJ3 777 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 C4orf50Q6ZRC1 276 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 RBBP8NLQ8NC74 664 aaPredicted RBP18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 ADAMTS19Q8TE59 1207 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 CYFIP2Q96F07 1278 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 GPR88Q9GZN0 384 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 KRT82Q9NSB4 513 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 APEX2Q9UBZ4 518 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 DPP7Q9UHL4 492 aa18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 MAGED2Q9UNF1 606 aaPredicted RBP18.22■□□□□ 0.51
SHROOM1-205ENST00000488072 SIK3Q9Y2K2 1263 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms