RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 L1RE1Q9UN81 338 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 SDK1Q7Z5N4 2213 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 ACAT1P24752 427 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 CYP2F1P24903 491 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 POLR2BP30876 1174 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 LONP1P36776 959 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 RPL10AP62906 217 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 USP4Q13107 963 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 DMC1Q14565 340 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 INTS6LQ5JSJ4 861 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 CFAP47Q6ZTR5 3102 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 ZNF720Q7Z2F6 126 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 SFR1Q86XK3 245 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 TTC16Q8NEE8 873 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 ACDQ96AP0 544 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 MYRFLQ96LU7 910 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 CYP2S1Q96SQ9 504 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 PKMYT1Q99640 499 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 ACBD6Q9BR61 282 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 EDEM2Q9BV94 578 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 ABCB6Q9NP58 842 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 DDX43Q9NXZ2 648 aaKnown RBP20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 EBF1Q9UH73 591 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 AGAP1Q9UPQ3 857 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 WNT6Q9Y6F9 365 aa20.91■□□□□ 0.94
SMPDL3A-202ENST00000487215 CNOT1A5YKK6 2376 aaKnown RBP20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 PPP1R37O75864 691 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 RHOBTB1O94844 696 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 ITGB3P05106 788 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 CKMP06732 381 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 IFNAR2P48551 515 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 TFAMQ00059 246 aaKnown RBP20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 CREB5Q02930 508 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 POSTNQ15063 836 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 CCDC142Q17RM4 750 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 EML3Q32P44 896 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 PSAPL1Q6NUJ1 521 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 C1orf127Q8N9H9 656 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 KRI1Q8N9T8 703 aaKnown RBP20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 ATP2A3Q93084 1043 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 HVCN1Q96D96 273 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 FAM213AQ9BRX8 229 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 TMEM206Q9H813 350 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 GTF3C4Q9UKN8 822 aa20.9■□□□□ 0.94
SMPDL3A-202ENST00000487215 TRAV19A0A0A6YYK7 116 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 BCLAF3A2AJT9 711 aaKnown RBP20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 TULP1O00294 542 aaPredicted RBP20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 HUS1O60921 280 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 USP17L7P0C7H9 530 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 MYL7Q01449 175 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 PSMD2Q13200 908 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 SCARA3Q6AZY7 606 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 OSTM1Q86WC4 334 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 ZSWIM2Q8NEG5 633 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 STRA6Q9BX79 667 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 ATG2BQ96BY7 2078 aa20.89■□□□□ 0.93
SMPDL3A-202ENST00000487215 CAVIN2O95810 425 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 BMP15O95972 392 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 DDIT3P35638 169 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 KCNA1Q09470 495 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 DYMQ7RTS9 669 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 BRSK2Q8IWQ3 736 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 TMEM86AQ8N2M4 240 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 CXorf38Q8TB03 319 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 SAAL1Q96ER3 474 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 TMX3Q96JJ7 454 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 FAM84AQ96KN4 292 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 GCNT4Q9P109 453 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 ZNF638Q14966 1978 aaKnown RBP20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 KIAA1549LQ6ZVL6 1849 aa20.88■□□□□ 0.93
SMPDL3A-202ENST00000487215 C2orf78A6NCI8 922 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 C4orf47A7E2U8 309 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 HCRTO43612 131 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 GBP1P32455 592 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 NOVA1P51513 510 aaKnown RBP20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 DGKEP52429 567 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 RABEP1Q15276 862 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 CFAP221Q4G0U5 840 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 SPATA2LQ8IUW3 424 aaPredicted RBP20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 LRRC52Q8N7C0 313 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 ARL14EPQ8N8R7 260 aaPredicted RBP20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 TSTD1Q8NFU3 115 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 SH3RF2Q8TEC5 729 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 GDAP2Q9NXN4 497 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 RBAKQ9NYW8 714 aaPredicted RBP20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 INVSQ9Y283 1065 aa20.87■□□□□ 0.93
SMPDL3A-202ENST00000487215 LNP1A1A4G5 178 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 GIPC1O14908 333 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 PROS1P07225 676 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 SF3A1Q15459 793 aaKnown RBP20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 USP49Q70CQ1 688 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 SCN4BQ8IWT1 228 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 CACTINQ8WUQ7 758 aaKnown RBP20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 TPSD1Q9BZJ3 242 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 LINC00597Q9H2U6 94 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 MRPL44Q9H9J2 332 aaKnown RBP20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 ITGA11Q9UKX5 1188 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 EXOC7Q9UPT5 735 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 SNX9Q9Y5X1 595 aa20.86■□□□□ 0.93
SMPDL3A-202ENST00000487215 MYO16Q9Y6X6 1858 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms