RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, human

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL2-215	ENST00000486927	GABRD	O14764	452 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	GIPC1	O14908	333 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	IL18RAP	O95256	599 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	USP17L7	P0C7H9	530 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	TSPY1	Q01534	308 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	CREB5	Q02930	508 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	CFAP221	Q4G0U5	840 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	USP39	Q53GS9	565 aa	Known RBP	13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	FAM171B	Q6P995	826 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	RASSF3	Q86WH2	238 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	ADGRG2	Q8IZP9	1017 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	TMEM86A	Q8N2M4	240 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	USP33	Q8TEY7	942 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	ATP2A3	Q93084	1043 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	TMEM206	Q9H813	350 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	GDAP2	Q9NXN4	497 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	RALY	Q9UKM9	306 aa	Known RBP	13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	GTF3C4	Q9UKN8	822 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927	CEP295	Q9C0D2	2601 aa		13.73	□□□□□ -0.21
ATL2-215	ENST00000486927		A0A0A0MRY4	1105 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	LNP1	A1A4G5	178 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	C1QTNF9B	B2RNN3	333 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	KHNYN	O15037	678 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	PPP1R37	O75864	691 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	C1QTNF9	P0C862	333 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	CEACAM1	P13688	526 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	PLCG1	P19174	1290 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	CSRP1	P21291	193 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	LONP1	P36776	959 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	NOVA1	P51513	510 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	WNT7B	P56706	349 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	ZXDB	P98169	803 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	NR1H3	Q13133	447 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	INTS6L	Q5JSJ4	861 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	DAB2IP	Q5VWQ8	1189 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	PMS2CL	Q68D20	193 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	LIMS2	Q7Z4I7	341 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	C11orf74	Q86VG3	221 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	KIAA1958	Q8N8K9	716 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	STKLD1	Q8NE28	680 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	SPATA18	Q8TC71	538 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	ACD	Q96AP0	544 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	ZHX3	Q9H4I2	956 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	DDX43	Q9NXZ2	648 aa	Known RBP	13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	L1RE1	Q9UN81	338 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	AGAP1	Q9UPQ3	857 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	WNT6	Q9Y6F9	365 aa		13.72	□□□□□ -0.21
ATL2-215	ENST00000486927	TRAV19	A0A0A6YYK7	116 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	HUS1	O60921	280 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	KRT18	P05783	430 aa	Known RBP	13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	HDC	P19113	662 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	OPRD1	P41143	372 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	DGKE	P52429	567 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	IRX4	P78413	519 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	GRIN1	Q05586	938 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	KCNA1	Q09470	495 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	GAB4	Q2WGN9	574 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	SH3PXD2A	Q5TCZ1	1133 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	LRRC52	Q8N7C0	313 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	C1orf127	Q8N9H9	656 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	OLIG1	Q8TAK6	271 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	SH3RF2	Q8TEC5	729 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	CACTIN	Q8WUQ7	758 aa	Known RBP	13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	POMGNT1	Q8WZA1	660 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	HVCN1	Q96D96	273 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	CEP295NL	Q96MC4	621 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	ZNF560	Q96MR9	790 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	EDEM2	Q9BV94	578 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	PPP4R2	Q9NY27	417 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	ZMIZ1	Q9ULJ6	1067 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	ARHGAP26	Q9UNA1	814 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	INVS	Q9Y283	1065 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	KIF3A	Q9Y496	699 aa		13.71	□□□□□ -0.21
ATL2-215	ENST00000486927	SDK1	Q7Z5N4	2213 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	C2orf78	A6NCI8	922 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	ANTXRL	A6NF34	631 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	TBCA	O75347	108 aa	Known RBP	13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	PFKL	P17858	780 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	ACAT1	P24752	427 aa	Known RBP	13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	MAGEA11	P43364	429 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	IFNAR2	P48551	515 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	LHX1	P48742	406 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	TFAM	Q00059	246 aa	Known RBP	13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	MYL7	Q01449	175 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	USP4	Q13107	963 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	CRY1	Q16526	586 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	SOWAHA	Q2M3V2	549 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	UNQ6494/PRO21346	Q6UXR6	183 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	DPH6	Q7L8W6	267 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	OSTM1	Q86WC4	334 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	CSGALNACT2	Q8N6G5	542 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	TOP6BL	Q8N6T0	577 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	KRI1	Q8N9T8	703 aa	Known RBP	13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	ZSWIM2	Q8NEG5	633 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	TSTD1	Q8NFU3	115 aa		13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	LARP4B	Q92615	738 aa	Known RBP	13.7	□□□□□ -0.22
ATL2-215	ENST00000486927	SPATA17	Q96L03	361 aa		13.7	□□□□□ -0.22

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