RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 TEX28O15482 410 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 MED7O43513 233 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 MICAL2O94851 1124 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 MMEP08473 750 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CFHP08603 1231 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CNPP09543 421 aaKnown RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CDH5P33151 784 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 NDUFV1P49821 464 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 SMARCB1Q12824 385 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 RAB33AQ14088 237 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CNGA2Q16280 664 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 NFE2Q16621 373 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 GOLGA7BQ2TAP0 167 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CFAP221Q4G0U5 840 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 SLC39A12Q504Y0 691 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 TAF3Q5VWG9 929 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 PLPP4Q5VZY2 271 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 PDE12Q6L8Q7 609 aaKnown RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CYP26C1Q6V0L0 522 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 TTC30AQ86WT1 665 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 PALB2Q86YC2 1186 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 DCP1BQ8IZD4 617 aaKnown RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 MRPL43Q8N983 215 aaKnown RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC112Q8NEF3 446 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 SLC30A5Q8TAD4 765 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 PCDHB18PQ96TA0 734 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 BAG1Q99933 345 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 B3GNT5Q9BYG0 378 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF518BQ9C0D4 1074 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 KCNF1Q9H3M0 494 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 NHEJ1Q9H9Q4 299 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-227ENST00000486806 ABCB6Q9NP58 842 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 ENTPD7Q9NQZ7 604 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 TMEM30AQ9NV96 361 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 PCDHGC5Q9Y5F6 944 aa10.16□□□□□ -0.78
MCF2L-227ENST00000486806 SOWAHDA6NJG2 315 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 M0QYV0 167 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CLDN5O00501 218 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 SOX1O00570 391 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 DDX3XO00571 662 aaKnown RBP eCLIP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 ABLIM3O94929 683 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 LSM8O95777 96 aaKnown RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CYP1A1P04798 512 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CPB1P15086 417 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 OR1D2P34982 312 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 EIF4A3P38919 411 aaKnown RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CACNA2D1P54289 1103 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 BCAT1P54687 386 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 NOMO3P69849 1222 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 TPGS2Q68CL5 300 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 RAD9BQ6WBX8 426 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 TRIM72Q6ZMU5 477 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 RNF19BQ6ZMZ0 732 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 C4orf50Q6ZRC1 276 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 TMTC1Q8IUR5 882 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CCDC170Q8IYT3 715 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 ANKRD52Q8NB46 1076 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 SPPL2BQ8TCT7 592 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 C2orf15Q8WU43 125 aaKnown RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 SMARCD1Q96GM5 515 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 KLHL5Q96PQ7 755 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 RHOBTB2Q9BYZ6 727 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 LHX5Q9H2C1 402 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 TTYH1Q9H313 450 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CRISPLD1Q9H336 500 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 ZNF576Q9H609 170 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 CSNK1G1Q9HCP0 422 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 KRT82Q9NSB4 513 aa10.15□□□□□ -0.78
MCF2L-227ENST00000486806 AFF4Q9UHB7 1163 aaKnown RBP10.15□□□□□ -0.78
MCF2L-227ENST00000486806 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 A0A087X0T9 212 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 LCA5LO95447 670 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 CXCL14O95715 111 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 C1RP00736 705 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 PTMAP06454 111 aaKnown RBP10.14□□□□□ -0.79
MCF2L-227ENST00000486806 ADH1AP07327 375 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 FAM228BP0C875 321 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 FAM200BP0CF97 657 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 SETSIPP0DME0 302 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 UNGP13051 313 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-227ENST00000486806 NPR3P17342 541 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 ADORA2BP29275 332 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-227ENST00000486806 GPD2P43304 727 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 MAGEA11P43364 429 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 KIF11P52732 1056 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 ARPP19P56211 112 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 CYP27A1Q02318 531 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 CENPCQ03188 943 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 BST2Q10589 180 aaKnown RBP10.14□□□□□ -0.79
MCF2L-227ENST00000486806 MTF1Q14872 753 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 SLC18A3Q16572 532 aa10.14□□□□□ -0.79
MCF2L-227ENST00000486806 CLEC16AQ2KHT3 1053 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms