RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 NUMBLQ9Y6R0 609 aa19.41■□□□□ 0.7
COL1A1-207ENST00000486572 NRG2O14511 850 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-207ENST00000486572 LRRN2O75325 713 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 MOSPD3O75425 235 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 MBD3O95983 291 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 GPR15P49685 360 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 MARSP56192 900 aaKnown RBP19.4■□□□□ 0.7
COL1A1-207ENST00000486572 DDR2Q16832 855 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 VSTM1Q6UX27 236 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 UNC93AQ86WB7 457 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 SHKBP1Q8TBC3 707 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 FAXDC2Q96IV6 333 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 CYP3A43Q9HB55 503 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 C11orf16Q9NQ32 467 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 COQ4Q9Y3A0 265 aa19.4■□□□□ 0.7
COL1A1-207ENST00000486572 A0A1W2PRU2 124 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 FAM86C2PA6NEL3 165 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 GPR37L1O60883 481 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 CSH1P0DML2 217 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 CSH2P0DML3 217 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 GJA1P17302 382 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 BDNFP23560 247 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 GABRR2P28476 465 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 FMO5P49326 533 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 NDST1P52848 882 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 NLRP12P59046 1061 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 SIGLEC14Q08ET2 396 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 INCA1Q0VD86 236 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 TEAD2Q15562 447 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 WDR44Q5JSH3 913 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 TMEM31Q5JXX7 168 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 SDHAF4Q5VUM1 108 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 PARM1Q6UWI2 310 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 TRIM67Q6ZTA4 783 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 TRIM59Q8IWR1 403 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 SCN4BQ8IWT1 228 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 FGF14Q92915 247 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 MED15Q96RN5 788 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 ELOVL4Q9GZR5 314 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 SMOC2Q9H3U7 446 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 HMGXB4Q9UGU5 601 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 DUSP12Q9UNI6 340 aa19.39■□□□□ 0.69
COL1A1-207ENST00000486572 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 TRIM21P19474 475 aaKnown RBP19.38■□□□□ 0.69
COL1A1-207ENST00000486572 CDC25CP30307 473 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 POTEHQ6S545 545 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 GAREM2Q75VX8 874 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 SLC44A3Q8N4M1 653 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 ST13P5Q8NFI4 369 aaPredicted RBP19.38■□□□□ 0.69
COL1A1-207ENST00000486572 CEP295NLQ96MC4 621 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 GCNAQ96QF7 691 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 GPR88Q9GZN0 384 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 ATXN3LQ9H3M9 355 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 SLITRK6Q9H5Y7 841 aa19.38■□□□□ 0.69
COL1A1-207ENST00000486572 PTPRDP23468 1912 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 ATP8B3O60423 1300 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 TRIM66O15016 1216 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 PMM2O15305 246 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 NOL4O94818 638 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 HMGA1P17096 107 aaKnown RBP19.37■□□□□ 0.69
COL1A1-207ENST00000486572 CD58P19256 250 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 ANXA13P27216 316 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 GRIK1P39086 918 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 RBM43Q6ZSC3 357 aaKnown RBP19.37■□□□□ 0.69
COL1A1-207ENST00000486572 ACOT1Q86TX2 421 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 CRYBG2Q8N1P7 616 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 STKLD1Q8NE28 680 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 TRMT2BQ96GJ1 504 aaKnown RBP19.37■□□□□ 0.69
COL1A1-207ENST00000486572 SPATA17Q96L03 361 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 B3GNT5Q9BYG0 378 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 ZNF518BQ9C0D4 1074 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 IL21Q9HBE4 155 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 MAGED2Q9UNF1 606 aaPredicted RBP19.37■□□□□ 0.69
COL1A1-207ENST00000486572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL1A1-207ENST00000486572 MYO10Q9HD67 2058 aa19.37■□□□□ 0.69
COL1A1-207ENST00000486572 TMEM221A6NGB7 291 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 SLC38A8A6NNN8 435 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 PRR33A8MZF0 331 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 M0R296 226 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 P4HA2O15460 535 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 CILPO75339 1184 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 ERCC5P28715 1186 aaPredicted RBP19.36■□□□□ 0.69
COL1A1-207ENST00000486572 CETN1Q12798 172 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 ORC1Q13415 861 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 ARHGAP15Q53QZ3 475 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 FAM78AQ5JUQ0 283 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 FAM35AQ86V20 835 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 TTC39CQ8N584 583 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 SMARCD2Q92925 531 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 CNOT6LQ96LI5 555 aaKnown RBP19.36■□□□□ 0.69
COL1A1-207ENST00000486572 C8orf48Q96LL4 319 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 MYRFLQ96LU7 910 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 ZSWIM3Q96MP5 696 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 ASB16Q96NS5 453 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 KXD1Q9BQD3 176 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 MED10Q9BTT4 135 aa19.36■□□□□ 0.69
COL1A1-207ENST00000486572 RPP25Q9BUL9 199 aaKnown RBP19.36■□□□□ 0.69
COL1A1-207ENST00000486572 NT5C1AQ9BXI3 368 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms