RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TMEM59LQ9UK28 342 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ODF2LQ9ULJ1 636 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 HCN4Q9Y3Q4 1203 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 IPPQ9Y573 584 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 HCFC2Q9Y5Z7 792 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ARHGEF35A5YM69 484 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TMCO5BA8MYB1 307 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 CEP104O60308 925 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 B4GALT3O60512 393 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 FTCDO95954 541 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 MYBP10242 640 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 CXCR5P32302 372 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 MLH1P40692 756 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 SLC11A1P49279 550 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 POU5F1BQ06416 359 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 KCNC3Q14003 757 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 DCAF17Q5H9S7 520 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TMEM184AQ6ZMB5 413 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 DDX53Q86TM3 631 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 PACS2Q86VP3 889 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 HOOK3Q86VS8 718 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 RNF135Q8IUD6 432 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 FAM186BQ8IYM0 893 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 RASGEF1CQ8N431 466 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 SMG8Q8ND04 991 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 MCPH1Q8NEM0 835 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 BCL7CQ8WUZ0 217 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 CASP10Q92851 521 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 REEP2Q9BRK0 252 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 PHF7Q9BWX1 381 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 NFKBIZQ9BYH8 718 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 STMN4Q9H169 189 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 CNOT10Q9H9A5 744 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 UBN1Q9NPG3 1134 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TBC1D7Q9P0N9 293 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 PARP2Q9UGN5 583 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 DBR1Q9UK59 544 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TTC7AQ9ULT0 858 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 UTP11Q9Y3A2 253 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 HES2Q9Y543 173 aa9.59□□□□□ -0.87
COL12A1-208ENST00000486533 TDRD15B5MCY1 1934 aaKnown RBP9.59□□□□□ -0.87
COL12A1-208ENST00000486533 ARL5CA6NH57 179 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PRR33A8MZF0 331 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 MIF4GDA9UHW6 222 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 P4HA2O15460 535 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 B4GALT5O43286 388 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SART1O43290 800 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CLASP2O75122 1294 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 DDHD2O94830 711 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 ALDH2P05091 517 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 TMEM253P0C7T8 217 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CTSAP10619 480 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 KRT13P13646 458 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 HOXB8P17481 243 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SP100P23497 879 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PON1P27169 355 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SNRPFP62306 86 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 ARID5AQ03989 594 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PTK2Q05397 1052 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CBX2Q14781 532 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 ECM1Q16610 540 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SYCE2Q6PIF2 218 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 IRF2BP2Q7Z5L9 587 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 YTHDF3Q7Z739 585 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CDR2LQ86X02 465 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 ZBTB8OSQ8IWT0 167 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 RHOT2Q8IXI1 618 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 HACE1Q8IYU2 909 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 IQCKQ8N0W5 287 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 RFFLQ8WZ73 363 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 P3H4Q92791 437 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 ZFP42Q96MM3 310 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 GDAP1L1Q96MZ0 367 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 GAD1Q99259 594 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PSMB7Q99436 277 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 TMEM175Q9BSA9 504 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 STK33Q9BYT3 514 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 EPN3Q9H201 632 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 NXF3Q9H4D5 531 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PARVGQ9HBI0 331 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PRG3Q9Y2Y8 225 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 FAM187AA6NFU0 413 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 KRIT1O00522 736 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 NPTXRO95502 500 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SOX5P35711 763 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 OR1G1P47890 313 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CCT5P48643 541 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 SCNN1GP51170 649 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 PRSS12P56730 875 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 JAM2P57087 298 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 DHX34Q14147 1143 aaKnown RBP9.58□□□□□ -0.88
COL12A1-208ENST00000486533 AMHR2Q16671 573 aa9.58□□□□□ -0.88
COL12A1-208ENST00000486533 CES5AQ6NT32 575 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms