RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 UXTQ9UBK9 157 aaPredicted RBP27.56■■■□□ 2
HLA-F-227ENST00000485513 SMG5Q9UPR3 1016 aaKnown RBP27.56■■■□□ 2
HLA-F-227ENST00000485513 DCHS1Q96JQ0 3298 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 HCRTO43612 131 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 F13A1P00488 732 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 CXCL12P48061 93 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 CCDC142Q17RM4 750 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 ITPRIPL2Q3MIP1 535 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 CFAP221Q4G0U5 840 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 DGKKQ5KSL6 1271 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 TXNDC8Q6A555 127 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 UNC13DQ70J99 1090 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 SPEM1Q8N4L4 309 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 GKN1Q9NS71 199 aa27.55■■■□□ 2
HLA-F-227ENST00000485513 SOBPA7XYQ1 873 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 TGFB1I1O43294 461 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 NOL4O94818 638 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 UBE4BO95155 1302 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 ME1P48163 572 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 SATB1Q01826 763 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 PON2Q15165 354 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 SNRNP35Q16560 246 aaKnown RBP27.54■■■□□ 2
HLA-F-227ENST00000485513 WDR44Q5JSH3 913 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 LIMS2Q7Z4I7 341 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 MON1AQ86VX9 555 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 RDH13Q8NBN7 331 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 USP13Q92995 863 aaPredicted RBP27.54■■■□□ 2
HLA-F-227ENST00000485513 TRMT2BQ96GJ1 504 aaKnown RBP27.54■■■□□ 2
HLA-F-227ENST00000485513 FUBP3Q96I24 572 aaKnown RBP eCLIP27.54■■■□□ 2
HLA-F-227ENST00000485513 KIF9Q9HAQ2 790 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 TDP1Q9NUW8 608 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 CCL26Q9Y258 94 aa27.54■■■□□ 2
HLA-F-227ENST00000485513 CASP1P29466 404 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 EHHADHQ08426 723 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 FAM171BQ6P995 826 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 ERMP1Q7Z2K6 904 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 SCN4BQ8IWT1 228 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 NELFCDQ8IXH7 590 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 SCFD1Q8WVM8 642 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 KBTBD7Q8WVZ9 684 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 SECISBP2LQ93073 1101 aaKnown RBP27.53■■■□□ 2
HLA-F-227ENST00000485513 SYT15Q9BQS2 421 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 BLZF1Q9H2G9 400 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 FAM13BQ9NYF5 915 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 PCDHA7Q9UN72 937 aa27.53■■■□□ 2
HLA-F-227ENST00000485513 CLIC2O15247 247 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 DLATP10515 647 aaKnown RBP27.52■■■□□ 2
HLA-F-227ENST00000485513 CYP2J2P51589 502 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 SNRPFP62306 86 aaKnown RBP27.52■■■□□ 2
HLA-F-227ENST00000485513 ATL3Q6DD88 541 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 C4orf50Q6ZRC1 276 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 Q6ZS52 159 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 HS2ST1Q7LGA3 356 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 TRAPPC11Q7Z392 1133 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 RMDN1Q96DB5 314 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 MYRFLQ96LU7 910 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 FNBP1Q96RU3 617 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 FAM83CQ9BQN1 747 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 CDH9Q9ULB4 789 aa27.52■■■□□ 2
HLA-F-227ENST00000485513 ATP2C2O75185 946 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 TADA3O75528 432 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 TNNI1P19237 187 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 LMO2P25791 158 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 MAGEA11P43364 429 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 PSMC1P62191 440 aaKnown RBP27.51■■□□□ 1.99
HLA-F-227ENST00000485513 PSMD6Q15008 389 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 RESP18Q5W5W9 173 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 XXYLT1Q8NBI6 393 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 MMS19Q96T76 1030 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 CEP250Q9BV73 2442 aa27.51■■□□□ 1.99
HLA-F-227ENST00000485513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.5■■□□□ 1.99
HLA-F-227ENST00000485513 WARSP23381 471 aaKnown RBP27.5■■□□□ 1.99
HLA-F-227ENST00000485513 CYP24A1Q07973 514 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 RUNX3Q13761 415 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 CCINQ13939 588 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 ZNF268Q14587 947 aaPredicted RBP27.5■■□□□ 1.99
HLA-F-227ENST00000485513 MAPRE1Q15691 268 aaKnown RBP27.5■■□□□ 1.99
HLA-F-227ENST00000485513 CCDC127Q96BQ5 260 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 CGRRF1Q99675 332 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 EBF3Q9H4W6 596 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 SLC39A2Q9NP94 309 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 HPS4Q9NQG7 708 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 MAGEC2Q9UBF1 373 aaPredicted RBP27.5■■□□□ 1.99
HLA-F-227ENST00000485513 CFAP45Q9UL16 551 aa27.5■■□□□ 1.99
HLA-F-227ENST00000485513 PVALEFA0A1B0GWK0 134 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 PDGFRBP09619 1106 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 AFMP43652 599 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 TRIM68Q6AZZ1 485 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 CC2D1AQ6P1N0 951 aaPredicted RBP27.49■■□□□ 1.99
HLA-F-227ENST00000485513 SYNPOQ8N3V7 929 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 MYLPFQ96A32 169 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 TRPC7Q9HCX4 862 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 CRTAC1Q9NQ79 661 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 RAB23Q9ULC3 237 aa27.49■■□□□ 1.99
HLA-F-227ENST00000485513 PAPSS2O95340 614 aaPredicted RBP27.48■■□□□ 1.99
HLA-F-227ENST00000485513 CST3P01034 146 aaPredicted RBP27.48■■□□□ 1.99
HLA-F-227ENST00000485513 CUL4BQ13620 913 aa27.48■■□□□ 1.99
HLA-F-227ENST00000485513 PKP1Q13835 747 aa27.48■■□□□ 1.99
HLA-F-227ENST00000485513 BMT2Q1RMZ1 405 aa27.48■■□□□ 1.99
HLA-F-227ENST00000485513 VSTM1Q6UX27 236 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms