RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 SLC39A4Q6P5W5 647 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TSTD1Q8NFU3 115 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 RASSF8Q8NHQ8 419 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
COL13A1-209ENST00000484990 POMGNT1Q8WZA1 660 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TRMT2BQ96GJ1 504 aaKnown RBP12.4□□□□□ -0.42
COL13A1-209ENST00000484990 MYRFLQ96LU7 910 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 CYP2S1Q96SQ9 504 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 ST6GALNAC4Q9H4F1 302 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TRPC7Q9HCX4 862 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.42
COL13A1-209ENST00000484990 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
COL13A1-209ENST00000484990 H3BQV1 296 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 LDHAP00338 332 aaKnown RBP12.39□□□□□ -0.43
COL13A1-209ENST00000484990 CKMP06732 381 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
COL13A1-209ENST00000484990 CYP2F1P24903 491 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 PDE6CP51160 858 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 MCM6Q14566 821 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 DDR2Q16832 855 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 UNQ6494/PRO21346Q6UXR6 183 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
COL13A1-209ENST00000484990 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
COL13A1-209ENST00000484990 R3HCC1Q9Y3T6 440 aaKnown RBP12.39□□□□□ -0.43
COL13A1-209ENST00000484990 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ALDH1A2O94788 518 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 NOL4O94818 638 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 SEC24BO95487 1268 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 NFATC1O95644 943 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 BMP15O95972 392 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 TCF3P15923 654 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 HDCP19113 662 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 DDIT3P35638 169 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 LONP1P36776 959 aaKnown RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 LHX1P48742 406 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 GPR15P49685 360 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 FOXC1Q12948 553 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 KCNB1Q14721 858 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ZNF77Q15935 545 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 EML3Q32P44 896 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ZC2HC1CQ53FD0 456 aaPredicted RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 SH3PXD2AQ5TCZ1 1133 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 SDHAF4Q5VUM1 108 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 PMS2CLQ68D20 193 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 SPATA2LQ8IUW3 424 aaPredicted RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 KDF1Q8NAX2 398 aaPredicted RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 RAD54LQ92698 747 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 HVCN1Q96D96 273 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL13A1-209ENST00000484990 FIZ1Q96SL8 496 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 GTF3C4Q9UKN8 822 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 ZMIZ1Q9ULJ6 1067 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 INVSQ9Y283 1065 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 TSC2P49815 1807 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 PCNX2A6NKB5 2137 aa12.38□□□□□ -0.43
COL13A1-209ENST00000484990 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 MYMKA6NI61 221 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 GIPC1O14908 333 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 C1QTNF9P0C862 333 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 PFKLP17858 780 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 PCSK1P29120 753 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
COL13A1-209ENST00000484990 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
COL13A1-209ENST00000484990 LMAN2Q12907 356 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 CRELD2Q6UXH1 353 aaPredicted RBP12.37□□□□□ -0.43
COL13A1-209ENST00000484990 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 RASSF3Q86WH2 238 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 RIN3Q8TB24 985 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 TPSD1Q9BZJ3 242 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 LINC00597Q9H2U6 94 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 EHD2Q9NZN4 543 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 WNT6Q9Y6F9 365 aa12.37□□□□□ -0.43
COL13A1-209ENST00000484990 OBSL1O75147 1896 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms