RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZPBP2Q6X784 338 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 MTERF4Q7Z6M4 381 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 SLC35F6Q8N357 371 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 RNF10Q8N5U6 811 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CEP112Q8N8E3 955 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 UBXN4Q92575 508 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 RPGRIP1Q96KN7 1286 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 ACAP3Q96P50 834 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 FNBP1Q96RU3 617 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 WDR24Q96S15 920 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 MSTO1Q9BUK6 570 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 SMOC2Q9H3U7 446 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 POMKQ9H5K3 350 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 EPHX3Q9H6B9 360 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 TMEM8AQ9HCN3 771 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 DNAJC12Q9UKB3 198 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 AGO2Q9UKV8 859 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 ANO9A1A5B4 782 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MACROD2A1Z1Q3 448 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 PODXLO00592 558 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 PJA2O43164 708 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 B3GAT3O94766 335 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 PIGRP01833 764 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 ADSSP30520 456 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 JAM2P57087 298 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 DSG1Q02413 1049 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 GFPT1Q06210 699 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 CYP24A1Q07973 514 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 BMS1Q14692 1282 aaKnown RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 DRAP1Q14919 205 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 SMAD2Q15796 467 aaKnown RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 UPP1Q16831 310 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 WHAMMP3Q1A5X7 153 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 ASTE1Q2TB18 679 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 JADE1Q6IE81 842 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 KIAA1841Q6NSI8 718 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 ALKAL1Q6UXT8 129 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 ENOSF1Q7L5Y1 443 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 CBWD2Q8IUF1 395 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 EFCAB13Q8IY85 973 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 PARD3BQ8TEW8 1205 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 SLC22A17Q8WUG5 538 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MFSD14AQ96MC6 490 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 NT5C1BQ96P26 610 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 NOX5Q96PH1 765 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 FAM213AQ9BRX8 229 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 COLEC11Q9BWP8 271 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 SIX2Q9NPC8 291 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 UBE2TQ9NPD8 197 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MAN1C1Q9NR34 630 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MRPL17Q9NRX2 175 aaKnown RBP7.4□□□□□ -1.22
BRCA1-216ENST00000484087 CNTN3Q9P232 1028 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MUTYHQ9UIF7 546 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 CDC23Q9UJX2 597 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 MRFAP1Q9Y605 127 aa7.4□□□□□ -1.22
BRCA1-216ENST00000484087 ATP8B3O60423 1300 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 SF3B1O75533 1304 aaKnown RBP eCLIP7.39□□□□□ -1.233e-17■■■■■ 109.4
BRCA1-216ENST00000484087 PTPRJQ12913 1337 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 A0A0B4J269 797 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 EFCAB8A8MWE9 144 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 F8VZ95 297 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 TGM5O43548 720 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 ADRB2P07550 413 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 OR4Q2P0C623 313 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 DLATP10515 647 aaKnown RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 TNNI1P19237 187 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 AP3M2P53677 418 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 MFAP3P55082 362 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 ARPP19P56211 112 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 MCCD1P59942 119 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 DLG4P78352 724 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 APBA1Q02410 837 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 PTK2Q05397 1052 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 CKAP4Q07065 602 aaKnown RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 PPP3CAQ08209 521 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 PSMD6Q15008 389 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 SURF1Q15526 300 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 PSMD5Q16401 504 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 ARHGAP44Q17R89 818 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 XKR4Q5GH76 650 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 WDR44Q5JSH3 913 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 CRELD2Q6UXH1 353 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 FAM43BQ6ZT52 329 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 IRF2BP2Q7Z5L9 587 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 GJD3Q8N144 294 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 FBXL13Q8NEE6 735 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 ANKK1Q8NFD2 765 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 LNX1Q8TBB1 728 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 CLSTN3Q9BQT9 956 aa7.39□□□□□ -1.23
BRCA1-216ENST00000484087 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-216ENST00000484087 CHST7Q9NS84 486 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms