RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SF3B1O75533 1304 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMAD9-204ENST00000483941 TRIP11Q15643 1979 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ANKRD62A6NC57 917 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 GRXCR2A6NFK2 248 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 BTNL10A8MVZ5 291 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 NRP1O14786 923 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 PJA2O43164 708 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 KIF5CO60282 957 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 MMEP08473 750 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 CHRNB2P17787 502 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 LAG3P18627 525 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 CYP27A1Q02318 531 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
SMAD9-204ENST00000483941 PTPN14Q15678 1187 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 CLEC16AQ2KHT3 1053 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 SPOUT1Q5T280 376 aaKnown RBP14.82□□□□□ -0.04
SMAD9-204ENST00000483941 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ARHGAP17Q68EM7 881 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 FBXO22Q8NEZ5 403 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 WHAMMQ8TF30 809 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 SLC20A1Q8WUM9 679 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ZNF689Q96CS4 500 aaPredicted RBP14.82□□□□□ -0.04
SMAD9-204ENST00000483941 PPP1R13BQ96KQ4 1090 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ACBD6Q9BR61 282 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ELOVL4Q9GZR5 314 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 ISCUQ9H1K1 167 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 DDX43Q9NXZ2 648 aaKnown RBP14.82□□□□□ -0.04
SMAD9-204ENST00000483941 INSL6Q9Y581 213 aa14.82□□□□□ -0.04
SMAD9-204ENST00000483941 A0A0A6YYK5 440 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 FTLP02792 175 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 CYP1A1P04798 512 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 GALTP07902 379 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 TMEM253P0C7T8 217 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 SETSIPP0DME0 302 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 PPM1AP35813 382 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 BCAR1P56945 870 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 TSPY1Q01534 308 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 YWHAHQ04917 246 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 LIN9Q5TKA1 542 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 OVOS1Q6IE37 1185 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 FAM117BQ6P1L5 589 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 LCLAT1Q6UWP7 414 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 C3orf58Q8NDZ4 430 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 LNX1Q8TBB1 728 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 KBTBD7Q8WVZ9 684 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 ZNF558Q96NG5 402 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 STRIP2Q9ULQ0 834 aa14.81□□□□□ -0.04
SMAD9-204ENST00000483941 PRG3Q9Y2Y8 225 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-204ENST00000483941 H3BQ06 376 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 H7C4K7 107 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 OAZ2O95190 189 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 CALB1P05937 261 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 UNGP13051 313 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 BRD2P25440 801 aaKnown RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 CDH5P33151 784 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 SLC11A1P49279 550 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 GPC5P78333 572 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 CENPCQ03188 943 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 SMARCB1Q12824 385 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 ACOT1Q86TX2 421 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 GPIHBP1Q8IV16 184 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 REXO1L1PQ8IX06 675 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 RHOT2Q8IXI1 618 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 MRPL38Q96DV4 380 aaKnown RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 CYFIP2Q96F07 1278 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 C17orf80Q9BSJ5 609 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 LZTFL1Q9NQ48 299 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 DNAJB4Q9UDY4 337 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 NENFQ9UMX5 172 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 FAM50BQ9Y247 325 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 REXO2Q9Y3B8 237 aaKnown RBP14.8□□□□□ -0.04
SMAD9-204ENST00000483941 RWDD3Q9Y3V2 267 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
SMAD9-204ENST00000483941 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 TDRD15B5MCY1 1934 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 O00370 1275 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 ZNF263O14978 683 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 PDGFRBP09619 1106 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 BRCC3P46736 316 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 NAP1L1P55209 391 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 ZP2Q05996 745 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 COL4A6Q14031 1691 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 PTPROQ16827 1216 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 PAN2Q504Q3 1202 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 PHF13Q86YI8 300 aaPredicted RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 DCP1BQ8IZD4 617 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 TMEM130Q8N3G9 435 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 FIBCD1Q8N539 461 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 ANKRD52Q8NB46 1076 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 IPO4Q8TEX9 1081 aaKnown RBP14.79□□□□□ -0.04
SMAD9-204ENST00000483941 STK32AQ8WU08 396 aa14.79□□□□□ -0.04
SMAD9-204ENST00000483941 SECISBP2LQ93073 1101 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms