RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 USP37Q86T82 979 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 DNAJC1Q96KC8 554 aaKnown RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 NTPCRQ9BSD7 190 aaKnown RBP13.03□□□□□ -0.32
CCDC78-213ENST00000482878 KIAA1586Q9HCI6 787 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
CCDC78-213ENST00000482878 PDLIM1O00151 329 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 TBX10O75333 385 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 ABHD2P08910 425 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.32
CCDC78-213ENST00000482878 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF677Q86XU0 584 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 MAP7D3Q8IWC1 876 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.02□□□□□ -0.32
CCDC78-213ENST00000482878 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.32
CCDC78-213ENST00000482878 ZNFX1Q9P2E3 1918 aaKnown RBP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 ZC3H11AO75152 810 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 OCRLQ01968 901 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 THOC5Q13769 683 aaKnown RBP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 ACSBG2Q5FVE4 666 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 C4orf33Q8N1A6 199 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 EXD1Q8NHP7 514 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 CEP170P1Q96L14 293 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 OLFM3Q96PB7 478 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 TTC1Q99614 292 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 MIS12Q9H081 205 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
CCDC78-213ENST00000482878 TELO2Q9Y4R8 837 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
CCDC78-213ENST00000482878 TXNDC9O14530 226 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 MAGEB2O15479 319 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF862O60290 1169 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 PSMG1O95456 288 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 PENKP01210 267 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 HLA-DRAP01903 254 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 JAK3P52333 1124 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 NOMO3P69849 1222 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TDRD10Q5VZ19 366 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 CEP70Q8NHQ1 597 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 CFAP57Q96MR6 1250 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TRABDQ9H4I3 376 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 STARD13Q9Y3M8 1113 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 LIASO43766 372 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TNNI1P19237 187 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 CBX3Q13185 183 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 MOGSQ13724 837 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 NME8Q8N427 588 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 GATA6Q92908 595 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF668Q96K58 619 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 NPHS2Q9NP85 383 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF510Q9Y2H8 683 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF646O15015 1829 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 RPL7AP62424 266 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 LRRC36Q1X8D7 754 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 SAMD3Q8N6K7 520 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 APOBEC3GQ9HC16 384 aaKnown RBP13.01□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
CCDC78-213ENST00000482878 WDR91A4D1P6 747 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 C4BPAP04003 597 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 KRT15P19012 456 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 ARSEP51690 589 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 YARSP54577 528 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 SEPT7Q16181 437 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 ZACNQ401N2 412 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 PLEKHA7Q6IQ23 1121 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 ABRAQ8N0Z2 381 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 CFAP61Q8NHU2 1237 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 RMDN3Q96TC7 470 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 GABBR1Q9UBS5 961 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SLC4A7Q9Y6M7 1214 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 LOXHD1Q8IVV2 1947 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 VNN1O95497 513 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 ITGA2BP08514 1039 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 VAV1P15498 845 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms