RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ADCY1Q08828 1119 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 PLS1Q14651 629 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 PRSS53Q2L4Q9 553 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 EMC4Q5J8M3 183 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 ZNF585AQ6P3V2 769 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 CASC1Q6TDU7 716 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 TMEM179Q6ZVK1 233 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 DPP9Q86TI2 863 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 RPAP2Q8IXW5 612 aaPredicted RBP7.41□□□□□ -1.22
CLK1-212ENST00000482590 CBARPQ8N350 705 aaPredicted RBP7.41□□□□□ -1.22
CLK1-212ENST00000482590 LCORLQ8N3X6 602 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 CPA6Q8N4T0 437 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 SLC17A8Q8NDX2 589 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 POF1BQ8WVV4 589 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 LPAR1Q92633 364 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 WWC2-AS2Q96NR7 200 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 CDK5RAP1Q96SZ6 601 aaKnown RBP7.41□□□□□ -1.22
CLK1-212ENST00000482590 CDC6Q99741 560 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 CHMP4BQ9H444 224 aaKnown RBP7.41□□□□□ -1.22
CLK1-212ENST00000482590 ANLNQ9NQW6 1124 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 RASSF1Q9NS23 344 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 PAG1Q9NWQ8 432 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 PCDHA2Q9Y5H9 948 aa7.41□□□□□ -1.22
CLK1-212ENST00000482590 MYH6P13533 1939 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 KBTBD13C9JR72 458 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 H7BY64 318 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 J3KRW8 73 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 CYR61O00622 381 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 WDR46O15213 610 aaKnown RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 STRNO43815 780 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 FLOT1O75955 427 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 MBD4O95243 580 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 HOXC6P09630 235 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 FAM200BP0CF97 657 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 ADORA2AP29274 412 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 ALDH5A1P51649 535 aaPredicted RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 GABPAQ06546 454 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 LRRC26Q2I0M4 334 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 CCDC92Q53HC0 331 aaPredicted RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 ARMC3Q5W041 872 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 DENND5AQ6IQ26 1287 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 ARHGEF18Q6ZSZ5 1173 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 RSRC2Q7L4I2 434 aaKnown RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 PALM2Q8IXS6 379 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 DEFB123Q8N688 67 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 KIAA1958Q8N8K9 716 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 GIMAP8Q8ND71 665 aaPredicted RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 SHCBP1Q8NEM2 672 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 USP7Q93009 1102 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 IPO9Q96P70 1041 aaKnown RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 TMEM209Q96SK2 561 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 LBHD1Q9BQE6 289 aaPredicted RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 NAA15Q9BXJ9 866 aaKnown RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 SENP6Q9GZR1 1112 aaPredicted RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 SPATC1LQ9H0A9 340 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 ARMT1Q9H993 441 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 ATP8A2Q9NTI2 1148 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 HOXC10Q9NYD6 342 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 FLRT1Q9NZU1 646 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 APOBEC2Q9Y235 224 aaKnown RBP7.4□□□□□ -1.22
CLK1-212ENST00000482590 PCDHGB3Q9Y5G1 929 aa7.4□□□□□ -1.22
CLK1-212ENST00000482590 A0A1W2PRG0 241 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 A6NCN8 305 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 PATE3B3GLJ2 98 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 DNM1LO00429 736 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 NEMP1O14524 444 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 B4GALT4O60513 344 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 CYP7B1O75881 506 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 CYP2D6P10635 497 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 CYBAP13498 195 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 AKR1B1P15121 316 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 LTBRP36941 435 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 NEK4P51957 841 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 LSAMPQ13449 338 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 COG2Q14746 738 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 TAF11Q15544 211 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 TRIM61Q5EBN2 209 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 ZSCAN25Q6NSZ9 544 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 CHST15Q7LFX5 561 aaPredicted RBP7.39□□□□□ -1.23
CLK1-212ENST00000482590 OTOP3Q7RTS5 596 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 SCUBE1Q8IWY4 988 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 PPIL6Q8IXY8 311 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 KLHL36Q8N4N3 616 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 SLC44A5Q8NCS7 719 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 DYNLL2Q96FJ2 89 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 FUBP3Q96I24 572 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLK1-212ENST00000482590 CHAMP1Q96JM3 812 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 PPM1MQ96MI6 270 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 MOV10L1Q9BXT6 1211 aaKnown RBP7.39□□□□□ -1.23
CLK1-212ENST00000482590 VPS11Q9H270 941 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 BOLA2Q9H3K6 86 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 DEF6Q9H4E7 631 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 MROH8Q9H579 483 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms