RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-233	ENST00000482563	IL1RL1	Q01638	556 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	AIMP1	Q12904	312 aa	Known RBP	7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	ZNF674	Q2M3X9	581 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	TRIM60	Q495X7	471 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC44A4	Q53GD3	710 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC2A7	Q6PXP3	512 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	RAB11FIP2	Q7L804	512 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	NLRP14	Q86W24	1093 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	GPR150	Q8NGU9	434 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	PPP1R14C	Q8TAE6	165 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	NCSTN	Q92542	709 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	PERP	Q96FX8	193 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	IWS1	Q96ST2	819 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	ANKRD2	Q9GZV1	360 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	RABEP2	Q9H5N1	569 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	PLA2G3	Q9NZ20	509 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	FAM169A	Q9Y6X4	670 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563		U3KQE9	123 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563	SYNRG	Q9UMZ2	1314 aa		7.94	□□□□□ -1.14
RBM39-233	ENST00000482563		A0A0A0MRY4	1105 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	NPIPB15	A6NHN6	443 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	FAM90A20P	A6NIJ5	464 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	PPP6R2	O75170	966 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	DNAJB5	O75953	348 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ANXA6	P08133	673 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	P4HA1	P13674	534 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	DDC	P20711	480 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ENDOU	P21128	410 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	PSMA4	P25789	261 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	PGM1	P36871	562 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ALDH18A1	P54886	795 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	RPP30	P78346	268 aa	Known RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	LRCH2	Q5VUJ6	765 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	TRIM68	Q6AZZ1	485 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ANO7	Q6IWH7	933 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	INO80C	Q6PI98	192 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ZNF804A	Q7Z570	1209 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	WDTC1	Q8N5D0	677 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC15A4	Q8N697	577 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	DNAJC5G	Q8N7S2	189 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	USP38	Q8NB14	1042 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	GDAP1	Q8TB36	358 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	HIST1H2AH	Q96KK5	128 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	UIMC1	Q96RL1	719 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	HIST1H2AJ	Q99878	128 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	DBNDD2	Q9BQY9	259 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	PDCL3	Q9H2J4	239 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	ERVMER34-1	Q9H9K5	563 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	MORF4L1	Q9UBU8	362 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	MTF2	Q9Y483	593 aa	Predicted RBP	7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	PCDHB4	Q9Y5E5	795 aa		7.93	□□□□□ -1.14
RBM39-233	ENST00000482563	NRP2	O60462	931 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	CD1A	P06126	327 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	KCNA2	P16389	499 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	FAH	P16930	419 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	RPL10	P27635	214 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	ECHS1	P30084	290 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC6A11	P48066	632 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC11A2	P49281	568 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	ZNF41	P51814	821 aa	Predicted RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	CD69	Q07108	199 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	NSUN2	Q08J23	767 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	MTM1	Q13496	603 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	TDG	Q13569	410 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	KCNB1	Q14721	858 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	COG2	Q14746	738 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	GRM4	Q14833	912 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	NRN1L	Q496H8	165 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	GLRX5	Q86SX6	157 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	SLC9B2	Q86UD5	537 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	N4BP2L2	Q92802	583 aa	Predicted RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	PTP4A1	Q93096	173 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	KTI12	Q96EK9	354 aa	Predicted RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	MED15	Q96RN5	788 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	SLAMF7	Q9NQ25	335 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	CAPN11	Q9UMQ6	739 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	RAB27B	O00194	218 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	N4BP3	O15049	544 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	TSPAN3	O60637	253 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	RASSF9	O75901	435 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	GLI1	P08151	1106 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	CPA1	P15085	419 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	FPR1	P21462	350 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	PTGS1	P23219	599 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	THPO	P40225	353 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	PSMC1	P62191	440 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	GALNTL6	Q49A17	601 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	C5orf22	Q49AR2	442 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	TRAPPC3L	Q5T215	181 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	CDKAL1	Q5VV42	579 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	FCRL6	Q6DN72	434 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	TAF2	Q6P1X5	1199 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	SHQ1	Q6PI26	577 aa	Known RBP	7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	LRRC8D	Q7L1W4	858 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	IRF2BP1	Q8IU81	584 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	YAF2	Q8IY57	180 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	THNSL1	Q8IYQ7	743 aa		7.92	□□□□□ -1.14
RBM39-233	ENST00000482563	PQLC1	Q8N2U9	271 aa		7.92	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms